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L1_008_000M1_scaffold_2188

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_2188_1
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(144..2096)
-----------------
DNA (1953bp)
protein (651aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Threonine--tRNA ligase n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EU88_9FIRM
threonine--tRNA ligase
L1_008_000M1_scaffold_2188_2
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3154..6036)
-----------------
DNA (2883bp)
protein (961aa)
von Willebrand factor type A domain protein n=2 Tax=Eubacterium RepID=C0EZA4_9FIRM
von Willebrand factor type A domain protein {ECO:0000313|EMBL:CDB18900.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L1_008_000M1_scaffold_2188_3
unknown

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comp(6023..6646)
-----------------
DNA (624bp)
protein (208aa)

This feature has no annotations

L1_008_000M1_scaffold_2188_4
unknown

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comp(6795..7172)
-----------------
DNA (378bp)
protein (126aa)

This feature has no annotations

L1_008_000M1_scaffold_2188_5
unknown

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comp(7318..7776)
-----------------
DNA (459bp)
protein (153aa)

This feature has no annotations

L1_008_000M1_scaffold_2188_6
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7842..8798)
-----------------
DNA (957bp)
protein (319aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EUD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG37098.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
L1_008_000M1_scaffold_2188_7
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9187..9492
-----------------
DNA (306bp)
protein (102aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G7F8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13048.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Helix-turn-helix.
L1_008_000M1_scaffold_2188_8
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9853..10659
-----------------
DNA (807bp)
protein (269aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N4Y6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY99045.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted branched-chain amino acid permease (azaleucine resistance)
L1_008_000M1_scaffold_2188_9
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10659..10979
-----------------
DNA (321bp)
protein (107aa)
Branched-chain amino acid transport protein AzlD n=2 Tax=Eubacterium RepID=C0EZA2_9FIRM
Branched-chain amino acid transport protein AzlD {ECO:0000313|EMBL:EEG35398.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Predicted branched-chain amino acid permeases (azaleucine resistance)
L1_008_000M1_scaffold_2188_10
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11882..13333)
-----------------
DNA (1452bp)
protein (484aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
glycogen/starch synthases, ADP-glucose type (EC:2.4.1.21)
Glycogen synthase n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GBA8_9FIRM
L1_008_000M1_scaffold_2188_11
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13405..14475)
-----------------
DNA (1071bp)
protein (357aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G065_9FIRM
L1_008_000M1_scaffold_2188_12
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14481..15560)
-----------------
DNA (1080bp)
protein (360aa)
Peptide chain release factor 1 n=2 Tax=Eubacterium RepID=C0EX95_9FIRM
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
bacterial peptide chain release factor 1 (bRF-1)
L1_008_000M1_scaffold_2188_13
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15799..16692)
-----------------
DNA (894bp)
protein (298aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Release factor glutamine methyltransferase n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EX94_9FIRM
protein-(glutamine-N5) methyltransferase, release factor-specific
L1_008_000M1_scaffold_2188_14
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16695..17603)
-----------------
DNA (909bp)
protein (303aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G3H0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG36130.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Predicted metal-dependent enzyme
L1_008_000M1_scaffold_2188_15
unknown

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comp(17633..17752)
-----------------
DNA (120bp)
protein (40aa)

This feature has no annotations

L1_008_000M1_scaffold_2188_16
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17786..17992)
-----------------
DNA (207bp)
protein (69aa)
50S ribosomal protein L31 n=2 Tax=Eubacterium RepID=C0EX92_9FIRM
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
LSU ribosomal protein L31P
L1_008_000M1_scaffold_2188_17
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18118..18729)
-----------------
DNA (612bp)
protein (204aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C0EX91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB18888.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L1_008_000M1_scaffold_2188_18
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18961..23664)
-----------------
DNA (4704bp)
protein (1568aa)
Fibronectin type III domain protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GC78_9FIRM
Fibronectin type III domain protein {ECO:0000313|EMBL:CDB18886.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Glycoside Hydrolase Family 25 protein
L1_008_000M1_scaffold_2188_19
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23721..24176)
-----------------
DNA (456bp)
protein (152aa)
Fibronectin type III domain protein n=2 Tax=Eubacterium RepID=C0EX90_9FIRM
Fibronectin type III domain protein {ECO:0000313|EMBL:EEG36127.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
L1_008_000M1_scaffold_2188_20
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24566..25135
-----------------
DNA (570bp)
protein (190aa)
BioY family protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G3G5_9FIRM
BioY family protein {ECO:0000313|EMBL:CDB18885.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
BioY protein
L1_008_000M1_scaffold_2188_21
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25429..27270
-----------------
DNA (1842bp)
protein (614aa)
sudA3; sulfide dehydrogenase subunit alpha (EC:1.8.-.- 1.18.1.2)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EX87_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EEG36124.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
L1_008_000M1_scaffold_2188_22
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27283..28926
-----------------
DNA (1644bp)
protein (548aa)
hydrogenases, Fe-only (EC:1.6.5.3)
Hydrogenase Fe-only n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G054_9FIRM
Hydrogenase Fe-only {ECO:0000313|EMBL:CDB18883.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
L1_008_000M1_scaffold_2188_23
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29368..30216)
-----------------
DNA (849bp)
protein (283aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GXT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB18882.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L1_008_000M1_scaffold_2188_24
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30570..31217)
-----------------
DNA (648bp)
protein (216aa)
HAD hydrolase, family IA, variant 1 n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EX84_9FIRM
HAD hydrolase, family IA, variant 1 {ECO:0000313|EMBL:EEG36121.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
HAD family hydrolase
L1_008_000M1_scaffold_2188_25
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31285..32586)
-----------------
DNA (1302bp)
protein (434aa)
transaldolase 1 (EC:2.2.1.2)
Uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EX83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG36120.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
L1_008_000M1_scaffold_2188_26
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33268..33951)
-----------------
DNA (684bp)
protein (228aa)
ABC transporter, ATP-binding protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EX82_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG36119.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
sugar ABC transporter ATP-binding protein
L1_008_000M1_scaffold_2188_27
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34532..35851
-----------------
DNA (1320bp)
protein (440aa)
ABC transporter solute-binding protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GAZ2_9FIRM
ABC transporter solute-binding protein {ECO:0000313|EMBL:CDB18779.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L1_008_000M1_scaffold_2188_28
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35985..36827
-----------------
DNA (843bp)
protein (281aa)
ABC transporter, permease protein n=2 Tax=Eubacterium RepID=C0EX80_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEG36117.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L1_008_000M1_scaffold_2188_29
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36827..37660
-----------------
DNA (834bp)
protein (278aa)
ABC transporter, permease protein n=2 Tax=Eubacterium RepID=C0EX79_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEG36116.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L1_008_000M1_scaffold_2188_30
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37690..38712
-----------------
DNA (1023bp)
protein (341aa)
Transcriptional regulator, LacI family n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EX78_9FIRM
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EEG36115.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
LacI family transcriptional regulator
Displaying items 1-30 of 38 in total

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