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L1_008_000M1_scaffold_2677

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_2677_1
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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206..838
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GR91_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL40316.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_008_000M1_scaffold_2677_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1010..2305)
DNA (1296bp) protein (432aa)
Site-specific recombinase XerD n=2 Tax=Clostridiales RepID=D4JIL5_9FIRM
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBK93462.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_008_000M1_scaffold_2677_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2466..3083)
DNA (618bp) protein (206aa)
Predicted transcriptional regulators n=1 Tax=Eubacterium rectale M104/1 RepID=D4JIL4_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBK93461.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_008_000M1_scaffold_2677_4
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3269..3499
DNA (231bp) protein (77aa)
DNA binding domain, excisionase family n=2 Tax=Clostridiales RepID=D4JIL3_9FIRM
DNA binding domain, excisionase family
Putative uncharacterized protein {ECO:0000313|EMBL:EEC58548.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
L1_008_000M1_scaffold_2677_5
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3581..5461
DNA (1881bp) protein (627aa)
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7APS3_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEC58547.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
MobA/MobL family.
L1_008_000M1_scaffold_2677_6
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5794..5946
DNA (153bp) protein (51aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=D4JIL1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK93458.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_008_000M1_scaffold_2677_7
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5927..9022
DNA (3096bp) protein (1032aa)
Bacterial Ig-like domain (Group 3) n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E1D8_9FIRM
Bacterial Ig-like domain (group 3).
Bacterial Ig-like domain (Group 3) {ECO:0000313|EMBL:CBK91659.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_008_000M1_scaffold_2677_8
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9499..9633)
DNA (135bp) protein (45aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R7CB28_9CLOT
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEC57696.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
L1_008_000M1_scaffold_2677_9
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9980..10891
DNA (912bp) protein (304aa)
Transcriptional regulator GltC n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZFB9_EUBR3
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ERI97969.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
transcriptional regulator GltC
L1_008_000M1_scaffold_2677_10
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11018..11269
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZFB8_EUBR3
flavodoxin
Uncharacterized protein {ECO:0000313|EMBL:ACR77190.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_008_000M1_scaffold_2677_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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11779..12699
DNA (921bp) protein (307aa)
Plasmid segregation actin-type ATPase ParM n=6 Tax=Firmicutes RepID=D4KSX7_9FIRM
plasmid segregation actin-type ATPase ParM
Plasmid segregation actin-type ATPase ParM {ECO:0000313|EMBL:CBL09979.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000M1_scaffold_2677_12
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12711..13151
DNA (441bp) protein (147aa)
Uncharacterized protein n=8 Tax=Firmicutes RepID=C0FYT1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK93658.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_008_000M1_scaffold_2677_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13130..13288
DNA (159bp) protein (53aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KSX9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL09981.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000M1_scaffold_2677_14
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13577..14575
DNA (999bp) protein (333aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C0FYS9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98418.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_008_000M1_scaffold_2677_15
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14585..14713
DNA (129bp) protein (43aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=D4KYE8_9FIRM
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEC56094.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
L1_008_000M1_scaffold_2677_16
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14685..15224
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7AV52_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEC56093.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
DNA repair protein
L1_008_000M1_scaffold_2677_17
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15229..16212
DNA (984bp) protein (328aa)
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7AV51_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEC56092.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
hypothetical protein
L1_008_000M1_scaffold_2677_18
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16583..17113
DNA (531bp) protein (177aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=D4S0X5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFF68081.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
L1_008_000M1_scaffold_2677_19
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17118..17450
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7AV48_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEC56089.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
hypothetical protein
L1_008_000M1_scaffold_2677_20
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17437..18885
DNA (1449bp) protein (483aa)
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7AV47_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98412.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_008_000M1_scaffold_2677_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18915..20108
DNA (1194bp) protein (398aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KSY5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL09987.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000M1_scaffold_2677_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20118..20522
DNA (405bp) protein (135aa)
Uncharacterized protein n=6 Tax=Clostridiales RepID=C7GGE7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU99111.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L1_008_000M1_scaffold_2677_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20522..21640
DNA (1119bp) protein (373aa)
Uncharacterized protein n=7 Tax=Clostridiales RepID=C0FYR9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL12393.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_2677_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21647..23356
DNA (1710bp) protein (570aa)
Type IV secretory pathway, VirD4 components n=3 Tax=Clostridiales RepID=D4JJ51_9FIRM
Type IV secretory pathway, VirD4 components
TraG/TraD family protein {ECO:0000313|EMBL:EEU99109.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L1_008_000M1_scaffold_2677_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23338..23712
DNA (375bp) protein (125aa)
Type IV secretory pathway, VirD4 components n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KSY8_9FIRM
Type IV secretory pathway, VirD4 components
Type IV secretory pathway, VirD4 components {ECO:0000313|EMBL:CBL09990.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000M1_scaffold_2677_26
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24014..24391
DNA (378bp) protein (126aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=C7GGE3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL12422.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_2677_27
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24446..25288
DNA (843bp) protein (281aa)
Putative uncharacterized protein n=3 Tax=Clostridiales RepID=D4JJ48_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK93645.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_008_000M1_scaffold_2677_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25301..25711
DNA (411bp) protein (137aa)
Uncharacterized protein n=8 Tax=Clostridiales RepID=C0FYR4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL12420.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_2677_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25726..26238
DNA (513bp) protein (171aa)
Uncharacterized protein n=6 Tax=Clostridiales RepID=C7GGE0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL12419.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_2677_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26266..26598)
DNA (333bp) protein (111aa)
Plasmid stabilization system protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KSZ3_9FIRM
Plasmid stabilization system protein
Plasmid stabilization system protein {ECO:0000313|EMBL:CBL09995.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Displaying items 1-30 of 47 in total

View Taxonomy