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L1_008_000M1_scaffold_2881

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_2881_1

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comp(1..633)
DNA (633bp) protein (211aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1SB26_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC57962.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_008_000M1_scaffold_2881_2
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(584..2155)
DNA (1572bp) protein (524aa)
Uncharacterized protein n=2 Tax=root RepID=R5E3J5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82746.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_008_000M1_scaffold_2881_3
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2310..3323)
DNA (1014bp) protein (338aa)
UDP-galactose 4-epimerase (EC:5.1.3.2)
UDP-galactose 4-epimerase {ECO:0000313|EMBL:CBL15367.1}; EC=5.1.3.2 {ECO:0000313|EMBL:CBL15367.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
UDP-galactose 4-epimerase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L6X2_9FIRM
L1_008_000M1_scaffold_2881_4
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3345..3863)
DNA (519bp) protein (173aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DRD1_9FIRM
L1_008_000M1_scaffold_2881_5
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3950..4984)
DNA (1035bp) protein (345aa)
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L6X0_9FIRM
L1_008_000M1_scaffold_2881_6
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5038..5472)
DNA (435bp) protein (145aa)
ribosomal-protein-alanine acetyltransferase (EC:2.3.1.128)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E3I9_9FIRM
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:CCX82741.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_008_000M1_scaffold_2881_7
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5462..5923)
DNA (462bp) protein (154aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Protein-tyrosine-phosphatase {ECO:0000313|EMBL:CBL15363.1}; EC=3.1.3.48 {ECO:0000313|EMBL:CBL15363.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Protein-tyrosine-phosphatase n=2 Tax=Ruminococcus RepID=D4L6W8_9FIRM
L1_008_000M1_scaffold_2881_8
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5883..8447)
DNA (2565bp) protein (855aa)
DNA polymerase I (EC:2.7.7.7)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460, ECO:0000313|EMBL:CBL15362.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
DNA polymerase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L6W7_9FIRM
L1_008_000M1_scaffold_2881_9
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8444..9622)
DNA (1179bp) protein (393aa)
alanine racemase (EC:5.1.1.1)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Alanine racemase n=2 Tax=Ruminococcus RepID=D4L6W6_9FIRM
L1_008_000M1_scaffold_2881_10
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9894..11459
DNA (1566bp) protein (522aa)
Sodium/proline symporter n=2 Tax=root RepID=R5E1Q2_9FIRM
Sodium/proline symporter {ECO:0000313|EMBL:CCX82737.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
sodium/proline symporter
L1_008_000M1_scaffold_2881_11
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11636..12214
DNA (579bp) protein (193aa)
xanthine phosphoribosyltransferase (EC:2.4.2.22)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Xanthine phosphoribosyltransferase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L6W4_9FIRM
L1_008_000M1_scaffold_2881_12
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12976..13509)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N3I4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC02849.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
Displaying 12 items

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