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L1_008_000M1_scaffold_6689

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_6689_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..78
DNA (78bp) protein (26aa)
DNA-binding helix-turn-helix protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHX3_9FIRM
Predicted transcriptional regulator with C-terminal CBS domains
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEU98850.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L1_008_000M1_scaffold_6689_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(103..336)
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L065_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13005.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_6689_3
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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585..797
DNA (213bp) protein (71aa)
Predicted transcriptional regulator n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KLR4_9FIRM
Predicted transcriptional regulator
XRE family transcriptional regulator {ECO:0000313|EMBL:AEN98338.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_008_000M1_scaffold_6689_4

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990..1313
DNA (324bp) protein (108aa)
DNA-binding helix-turn-helix protein n=3 Tax=root RepID=C0FXS4_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:EKC51314.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_008_000M1_scaffold_6689_5
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1965..2387
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FXS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG92591.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L1_008_000M1_scaffold_6689_6
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2396..2770
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FXS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG92592.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L1_008_000M1_scaffold_6689_7
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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3165..4448
DNA (1284bp) protein (428aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JRG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34983.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
Retron-type reverse transcriptase
L1_008_000M1_scaffold_6689_8
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4545..4976
DNA (432bp) protein (144aa)
Growth inhibitor n=4 Tax=Clostridiales RepID=D4JMT7_9FIRM
Growth inhibitor
Growth inhibitor {ECO:0000313|EMBL:CCY29421.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L1_008_000M1_scaffold_6689_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5014..5262
DNA (249bp) protein (83aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=C7GH38_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL07392.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000M1_scaffold_6689_10
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5402..7093
DNA (1692bp) protein (564aa)
Site-specific recombinases, DNA invertase Pin homologs n=2 Tax=Clostridiales RepID=D4JMT9_9FIRM
Site-specific recombinases, DNA invertase Pin homologs
Site-specific recombinases, DNA invertase Pin homologs {ECO:0000313|EMBL:CBK92293.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_008_000M1_scaffold_6689_11
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7095..8777
DNA (1683bp) protein (561aa)
Site-specific recombinases, DNA invertase Pin homologs n=2 Tax=Clostridiales RepID=D4JMU0_9FIRM
Site-specific recombinases, DNA invertase Pin homologs
Site-specific recombinases, DNA invertase Pin homologs {ECO:0000313|EMBL:CBK92294.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_008_000M1_scaffold_6689_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8770..10320
DNA (1551bp) protein (517aa)
Site-specific recombinases, DNA invertase Pin homologs n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KKJ3_9FIRM
Site-specific recombinases, DNA invertase Pin homologs {ECO:0000313|EMBL:CBL07395.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Site-specific recombinases, DNA invertase Pin homologs
Displaying 12 items

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