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L1_008_000M1_scaffold_4094

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_4094_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..237)
DNA (237bp) protein (79aa)
TnpX site-specific recombinase n=1 Tax=human gut metagenome RepID=K1UES5_9ZZZZ
Site-specific recombinases, DNA invertase Pin homologs
TnpX site-specific recombinase {ECO:0000313|EMBL:EEU99506.1}; Flags: Fragment;; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L1_008_000M1_scaffold_4094_2
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(244..441)
DNA (198bp) protein (66aa)
Uncharacterized protein n=8 Tax=root RepID=A7VG15_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14548.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_008_000M1_scaffold_4094_3
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(684..1976)
DNA (1293bp) protein (431aa)
Predicted P-loop ATPase and inactivated derivatives n=9 Tax=root RepID=D4KA39_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98190.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_008_000M1_scaffold_4094_4
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1990..2631)
DNA (642bp) protein (214aa)
DNA primase n=3 Tax=root RepID=G2T4R3_ROSHA
DNA primase
DNA primase {ECO:0000313|EMBL:CDC37589.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
L1_008_000M1_scaffold_4094_5
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2696..4285)
DNA (1590bp) protein (530aa)
Putative conjugal transfer protein n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6R3D2_9FIRM
Putative conjugal transfer protein {ECO:0000313|EMBL:CDC37591.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
putative conjugal transfer protein
L1_008_000M1_scaffold_4094_6
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4438..4797)
DNA (360bp) protein (120aa)
Uncharacterized protein n=9 Tax=root RepID=A7VG11_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98193.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_008_000M1_scaffold_4094_7
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5085..5387)
DNA (303bp) protein (101aa)
Uncharacterized protein n=10 Tax=root RepID=A7VG10_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98194.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_008_000M1_scaffold_4094_8
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5384..5716)
DNA (333bp) protein (111aa)
Uncharacterized protein n=13 Tax=root RepID=A7VG09_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK81233.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L1_008_000M1_scaffold_4094_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5717..5902)
DNA (186bp) protein (62aa)
Uncharacterized protein n=10 Tax=Clostridiales RepID=A7VG08_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU98912.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L1_008_000M1_scaffold_4094_10
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6438..7259
DNA (822bp) protein (274aa)
Helix-turn-helix n=10 Tax=Clostridiales RepID=D4JA60_9FIRM
Helix-turn-helix.
Transcriptional regulator, XRE family protein {ECO:0000313|EMBL:AEN98197.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_008_000M1_scaffold_4094_11
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7773..8300)
DNA (528bp) protein (176aa)
Uncharacterized protein n=8 Tax=root RepID=C0FQW2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL36774.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L1_008_000M1_scaffold_4094_12
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8522..8731)
DNA (210bp) protein (70aa)
Predicted transcriptional regulator n=11 Tax=Clostridiales RepID=D4JA57_9FIRM
Predicted transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:AEN98200.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
Displaying 12 items

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