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L1_008_000M1_scaffold_1

Search features with annotation key words

Displaying items 121-150 of 309 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1_121
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(136138..137022)
DNA (885bp) protein (295aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A1A0A0_BIFAA
Uncharacterized protein {ECO:0000313|EMBL:KIM02264.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
hypothetical protein
L1_008_000M1_scaffold_1_122
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

137100..138152
DNA (1053bp) protein (351aa)
N utilization substance homolog n=3 Tax=Bifidobacterium RepID=A1A0A1_BIFAA
transcription elongation factor NusA
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L1_008_000M1_scaffold_1_123
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

138365..141160
DNA (2796bp) protein (932aa)
Translation initiation factor IF-2 n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=IF2_BIFAA
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
translation initiation factor IF-2
L1_008_000M1_scaffold_1_124
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

141270..141773
DNA (504bp) protein (168aa)
Ribosome-binding factor A n=3 Tax=Bifidobacterium RepID=RBFA_BIFAA
ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_125
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

141757..142827
DNA (1071bp) protein (357aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
tRNA pseudouridine synthase B n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A460_BIFAD
tRNA pseudouridine synthase B
L1_008_000M1_scaffold_1_126
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

142897..144126
DNA (1230bp) protein (410aa)
Riboflavin kinase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GQ91_9BIFI
riboflavin kinase
Riboflavin kinase {ECO:0000313|EMBL:AII75790.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_127
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(144257..145675)
DNA (1419bp) protein (473aa)
DNA repair protein radA n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0A6_BIFAA
DNA repair protein RadA
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_128
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

145825..146469
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GPT9_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII75792.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_129
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

146644..146733
DNA (90bp) protein (30aa)
Uncharacterized protein n=16 Tax=Bifidobacterium RepID=B3DQF6_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI95902.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
L1_008_000M1_scaffold_1_130
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(146868..147566)
DNA (699bp) protein (233aa)
ribose-5-phosphate isomerase A (EC:5.3.1.6)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Ribose-5-phosphate isomerase A n=3 Tax=Bifidobacterium RepID=RPIA_BIFAA
L1_008_000M1_scaffold_1_131
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(147787..149142)
DNA (1356bp) protein (452aa)
Ribonuclease H n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GPU5_9BIFI
Ribonuclease H {ECO:0000313|EMBL:CCY19435.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
ribonuclease H
L1_008_000M1_scaffold_1_132
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(149247..150635)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0B1_BIFAA
two-component sensor histidine kinase
Two-component sensor histidine kinase {ECO:0000313|EMBL:AII75795.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_133
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(150637..151452)
DNA (816bp) protein (272aa)
Response regulator receiver domain protein n=2 Tax=Bifidobacterium RepID=A7A468_BIFAD
two-component response regulator
Response regulator receiver domain protein {ECO:0000313|EMBL:CCY19438.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L1_008_000M1_scaffold_1_134
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(151668..153323)
DNA (1656bp) protein (552aa)
pgm; phosphoglucomutase (EC:5.4.2.2)
Phosphoglucomutase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0B3_BIFAA
Phosphoglucomutase {ECO:0000313|EMBL:BAF39146.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L1_008_000M1_scaffold_1_135
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

153665..155758
DNA (2094bp) protein (698aa)
Phosphotransferase system, EIIC n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A473_BIFAD
Phosphotransferase system, EIIC {ECO:0000313|EMBL:EDN83705.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
PTS system, glucose-specific IIABC component
L1_008_000M1_scaffold_1_136
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

155790..156638
DNA (849bp) protein (283aa)
Transcription antiterminator similar to LicT n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H5Z3_9BIFI
transcription antiterminator similar to LicT
Transcription antiterminator BglG {ECO:0000313|EMBL:KIM02251.1}; Transcription antiterminator similar to LicT {ECO:0000313|EMBL:AJE05369.1}; Transcription antiterminator, BglG family {ECO:0000313|EMBL:AII75799.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_137
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(156693..157880)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A1A0B6_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY20188.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L1_008_000M1_scaffold_1_138
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

158014..159300
DNA (1287bp) protein (429aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
Serine--tRNA ligase n=2 Tax=Bifidobacterium RepID=SYS_BIFAA
L1_008_000M1_scaffold_1_139
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(159700..160380)
DNA (681bp) protein (227aa)
Response regulator of two-component system n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GRZ7_9BIFI
response regulator of two-component system
Response regulator of two-component system {ECO:0000313|EMBL:CCY20190.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L1_008_000M1_scaffold_1_140
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(160434..161933)
DNA (1500bp) protein (500aa)
PspC domain protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H5Z7_9BIFI
PspC domain protein {ECO:0000313|EMBL:EDN83713.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
histidine kinase sensor of two component system
L1_008_000M1_scaffold_1_141
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

162125..163960
DNA (1836bp) protein (612aa)
PspC domain protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A481_BIFAD
Phage shock protein C, PspC {ECO:0000313|EMBL:KFI87627.1}; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
hypothetical protein
L1_008_000M1_scaffold_1_142
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

163957..164571
DNA (615bp) protein (205aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A1A0C1_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII75805.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_143
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(164530..166347)
DNA (1818bp) protein (606aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GS81_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY18599.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
putative dipeptidyl aminopeptidases/acylaminoacyl-peptidase
L1_008_000M1_scaffold_1_144
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(166713..167867)
DNA (1155bp) protein (385aa)
AraJ-like protein probably involved in transport of arabinose polymers n=2 Tax=Bifidobacterium RepID=A1A0C3_BIFAA
AraJ-like protein
AraJ-like protein probably involved in transport of arabinose polymers {ECO:0000313|EMBL:BAF39156.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L1_008_000M1_scaffold_1_145
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

168198..169877
DNA (1680bp) protein (560aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H0X7_9BIFI
L1_008_000M1_scaffold_1_146
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

170185..171069
DNA (885bp) protein (295aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000313|EMBL:EDN83720.1}; EC=2.5.-.- {ECO:0000313|EMBL:EDN83720.1};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
1,4-dihydroxy-2-naphthoate octaprenyltransferase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A487_BIFAD
menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase
L1_008_000M1_scaffold_1_147
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

171222..171962
DNA (741bp) protein (247aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=4 Tax=Bifidobacterium RepID=A1A0C6_BIFAA
gpmA; phosphoglyceromutase
L1_008_000M1_scaffold_1_148
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(172189..174069)
DNA (1881bp) protein (627aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A489_BIFAD
myosin-cross-reactive antigen
Uncharacterized protein {ECO:0000313|EMBL:EDN83722.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L1_008_000M1_scaffold_1_149
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(174390..175070)
DNA (681bp) protein (227aa)
Phosphate-specific transport system accessory protein PhoU n=2 Tax=Bifidobacterium RepID=A7A490_BIFAD
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
response regulator of two-component system
L1_008_000M1_scaffold_1_150
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

175252..176442
DNA (1191bp) protein (397aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Sensor protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0C9_BIFAA
sensor protein
Displaying items 121-150 of 309 in total

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