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L1_008_000M1_scaffold_1

Search features with annotation key words

Displaying items 1-30 of 309 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1_1
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..310
DNA (309bp) protein (103aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
Glucose-6-phosphate isomerase n=2 Tax=Bifidobacterium adolescentis RepID=A0ZZX9_BIFAA
pgi; glucose-6-phosphate isomerase
L1_008_000M1_scaffold_1_2
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


708..1073
DNA (366bp) protein (122aa)
50S ribosomal protein L19 n=3 Tax=Bifidobacterium RepID=RL19_BIFAA
50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_3
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1192..1839
DNA (648bp) protein (216aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
Signal peptidase I n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H5V5_9BIFI
Signal peptidase I
L1_008_000M1_scaffold_1_4
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1839..2555
DNA (717bp) protein (239aa)
Ribonuclease {ECO:0000256|RuleBase:RU003515}; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Ribonuclease n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3S0_BIFAD
ribonuclease
L1_008_000M1_scaffold_1_5
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2665..3426
DNA (762bp) protein (254aa)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:KFI87492.1}; EC=3.6.3.28 {ECO:0000313|EMBL:KFI87492.1};; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BQT2_9BIFI
ABC transporter ATP-binding protein
L1_008_000M1_scaffold_1_6
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3423..4928
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A0ZZY4_BIFAA
Putative permease protein {ECO:0000313|EMBL:KFI87493.1}; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
permease
L1_008_000M1_scaffold_1_7
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4976..5920)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A0ZZY5_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE05238.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_8
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6058..7254
DNA (1197bp) protein (399aa)
Succinyl-diaminopimelate desuccinylase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A0ZZY6_BIFAA
succinyl-diaminopimelate desuccinylase
Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:AII75673.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_9
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7839..10520
DNA (2682bp) protein (894aa)
Ribonuclease G {ECO:0000313|EMBL:KFI96419.1}; EC=3.1.26.12 {ECO:0000313|EMBL:KFI96419.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Ribonuclease G n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A0ZZY7_BIFAA
ribonuclease G
L1_008_000M1_scaffold_1_10
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


10665..10973
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=2 Tax=Bifidobacterium RepID=RL21_BIFAA
rplU; 50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L1_008_000M1_scaffold_1_11
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


11013..11264
DNA (252bp) protein (84aa)
50S ribosomal protein L27 n=10 Tax=Bifidobacterium RepID=RL27_BIFAA
rpmA; 50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
L1_008_000M1_scaffold_1_12
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11343..13034
DNA (1692bp) protein (564aa)
GTPase Obg n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3T0_BIFAD
GTP-binding protein, GTP1/OBG family
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L1_008_000M1_scaffold_1_13
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13117..14250
DNA (1134bp) protein (378aa)
proB; gamma-glutamyl kinase (EC:2.7.2.11)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Glutamate 5-kinase n=2 Tax=Bifidobacterium adolescentis RepID=PROB_BIFAA
L1_008_000M1_scaffold_1_14
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14374..15582
DNA (1209bp) protein (403aa)
Aminotransferase, class I/II n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3T2_BIFAD
aspartate aminotransferase
Aspartate aminotransferase {ECO:0000313|EMBL:AJE05245.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_15
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15947..16174
DNA (228bp) protein (76aa)
Protein translocase subunit SecE n=3 Tax=Bifidobacterium RepID=A0ZZZ3_BIFAA
preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_16
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16199..17023
DNA (825bp) protein (275aa)
Transcription termination/antitermination protein NusG n=3 Tax=root RepID=A0ZZZ4_BIFAA
nusG; transcription antitermination protein nusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L1_008_000M1_scaffold_1_17
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


17368..17799
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=3 Tax=Bifidobacterium RepID=RL11_BIFAA
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L1_008_000M1_scaffold_1_18
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


17814..18506
DNA (693bp) protein (231aa)
50S ribosomal protein L1 n=3 Tax=Bifidobacterium RepID=RL1_BIFAA
rplA; 50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L1_008_000M1_scaffold_1_19
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18654..19433)
DNA (780bp) protein (260aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A0ZZZ7_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF39030.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L1_008_000M1_scaffold_1_20
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19517..21712
DNA (2196bp) protein (732aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GRB9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY19945.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
hypothetical protein
L1_008_000M1_scaffold_1_21
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21709..22659
DNA (951bp) protein (317aa)
Putative biotin--[acetyl-CoA-carboxylase] ligase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3U0_BIFAD
Putative biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000313|EMBL:EDN83573.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
hypothetical protein
L1_008_000M1_scaffold_1_22
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23093..23686)
DNA (594bp) protein (198aa)
BioY family protein n=3 Tax=Bifidobacterium RepID=A7A3U2_BIFAD
putative integral membrane with weak similarity to proteins in BioY family
Biotin BioY-family transporter {ECO:0000313|EMBL:AII75687.1}; Putative integral membrane with weak similarity to proteins in BioY family {ECO:0000313|EMBL:AJE05253.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_23
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23801..25786
DNA (1986bp) protein (662aa)
Carbamoyl-phosphate synthase L chain ATP binding domain protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GRV1_9BIFI
JadJ
JadJ {ECO:0000313|EMBL:AJE05254.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_24
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25783..27429
DNA (1647bp) protein (549aa)
Propionyl-CoA carboxylase beta chain n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A003_BIFAA
pccB; propionyl-CoA carboxylase subunit beta
Propionyl-CoA carboxylase beta chain {ECO:0000313|EMBL:BAF39036.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L1_008_000M1_scaffold_1_25
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27504..36842
DNA (9339bp) protein (3113aa)
Type I multifunctional fatty acid synthase {ECO:0000313|EMBL:KFI96436.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KFI96436.1};; EC=2.3.1.41 {ECO:0000313|EMBL:KFI96436.1};; EC=2.3.1.86 {ECO:0000313|EMBL:KFI96436.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Probable fatty acid synthase Fas n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A004_BIFAA
fatty acid synthase Fas
L1_008_000M1_scaffold_1_26
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37001..37459
DNA (459bp) protein (153aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237180};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Holo-[acyl-carrier-protein] synthase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GUY4_9BIFI
protein with similarity to holo-[acyl-carrier protein] synthase
L1_008_000M1_scaffold_1_27
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37765..38442
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A006_BIFAA
Membrane protein {ECO:0000313|EMBL:KIM02217.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
hypothetical protein
L1_008_000M1_scaffold_1_28
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


38598..38867
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=9 Tax=Bifidobacterium RepID=RS15_BIFAA
30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_000M1_scaffold_1_29
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39098..41776
DNA (2679bp) protein (893aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000256|SAAS:SAAS00274805}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000256|SAAS:SAAS00274803};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Polyribonucleotide nucleotidyltransferase n=2 Tax=Bifidobacterium adolescentis RepID=PNP_BIFAA
pnpA; polynucleotide phosphorylase/polyadenylase
L1_008_000M1_scaffold_1_30
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

42085..42645
DNA (561bp) protein (187aa)
LemA family protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H5W5_9BIFI
LemA-like protein
LemA family protein {ECO:0000313|EMBL:CCY20151.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
Displaying items 1-30 of 309 in total

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