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L1_008_000M1_scaffold_1

Search features with annotation key words

Displaying items 61-90 of 309 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1_61
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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80288..80923
DNA (636bp) protein (212aa)
Acetyltransferase GNAT family n=2 Tax=Bifidobacterium RepID=R5GL27_9BIFI
acetytransferase
Acetyltransferase {ECO:0000313|EMBL:KIM02320.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_62
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

80983..82179
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3Y9_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:EDN83622.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
hypothetical protein
L1_008_000M1_scaffold_1_63
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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82402..82695
DNA (294bp) protein (98aa)
10 kDa chaperonin n=3 Tax=Bifidobacterium RepID=CH10_BIFAA
groES; co-chaperonin GroES
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
L1_008_000M1_scaffold_1_64
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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83203..83373
DNA (171bp) protein (57aa)
50S ribosomal protein L33 n=10 Tax=Bifidobacterium RepID=RL33_BIFAA
50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_000M1_scaffold_1_65
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

83435..84634
DNA (1200bp) protein (400aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3Z2_BIFAD
UDP-N-acetylenolpyruvoylglucosamine reductase
L1_008_000M1_scaffold_1_66
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

84740..86239
DNA (1500bp) protein (500aa)
Amino acid permease n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3Z3_BIFAD
putative cationic amino acid transporter
Amino acid permease {ECO:0000313|EMBL:EDN83626.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L1_008_000M1_scaffold_1_67
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

86276..86596
DNA (321bp) protein (107aa)
4Fe-4S binding domain protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3Z4_BIFAD
ferredoxin
Ferredoxin {ECO:0000313|EMBL:AII75732.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_68
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

86804..87952
DNA (1149bp) protein (383aa)
Succinyldiaminopimelate transaminase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3Z5_BIFAD
putative aminotransferase
N-succinyldiaminopimelate aminotransferase {ECO:0000313|EMBL:AII75733.1}; Putative aminotransferase {ECO:0000313|EMBL:AJE05300.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_69
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(88137..88736)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A046_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF39079.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L1_008_000M1_scaffold_1_70
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

88934..90976
DNA (2043bp) protein (681aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3Z6_BIFAD
putative beta-helix repeat domain
Membrane protein {ECO:0000313|EMBL:KIM02312.1}; Putative beta-helix repeat domain {ECO:0000313|EMBL:AII75734.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_71
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

90978..92117
DNA (1140bp) protein (380aa)
Xylanase Y {ECO:0000313|EMBL:KFI96482.1}; EC=3.2.1.156 {ECO:0000313|EMBL:KFI96482.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Glycosyl hydrolase family 8 n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FGU1_9BIFI
xylanase Y
L1_008_000M1_scaffold_1_72
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

92114..93721
DNA (1608bp) protein (536aa)
Arabinofuranohydrolase d3 {ECO:0000313|EMBL:KFI96483.1}; EC=3.2.1.37 {ECO:0000313|EMBL:KFI96483.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Glycosyl hydrolase, family 43 n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FGU2_9BIFI
putative family 43 glycosyl hydrolase
L1_008_000M1_scaffold_1_73
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

93718..95169
DNA (1452bp) protein (484aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Carboxylesterase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XWY2_9BIFI
putative esterase
L1_008_000M1_scaffold_1_74
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

96048..97379
DNA (1332bp) protein (444aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113, ECO:0000256|SAAS:SAAS00019792};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
DNA polymerase IV n=2 Tax=Bacteria RepID=R5GW51_9BIFI
DNA-damage-inducible protein P
L1_008_000M1_scaffold_1_75
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

97418..98785
DNA (1368bp) protein (456aa)
Bacterial capsule synthesis protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A403_BIFAD
bacterial capsule synthesis protein PGA_cap
Bacterial capsule synthesis protein PGA_cap {ECO:0000313|EMBL:AII75739.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_76
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

98865..99854
DNA (990bp) protein (330aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EDN83637.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EDN83637.1};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
4-phosphoerythronate dehydrogenase n=2 Tax=Bifidobacterium RepID=A7A404_BIFAD
2-hydroxyacid dehydrogenase
L1_008_000M1_scaffold_1_77
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

99914..100552
DNA (639bp) protein (213aa)
Uncharacterized protein n=4 Tax=Bacteria RepID=A1A054_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE05308.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_78
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

100598..101260
DNA (663bp) protein (221aa)
Leucine rich repeat variant n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A406_BIFAD
AbrB family trancriptional regulator fused to LRR containing domain
AbrB family trancriptional regulator fused to LRR containing domain {ECO:0000313|EMBL:AJE05309.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_79
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

101330..103492
DNA (2163bp) protein (721aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Glycoside hydrolase family 77 n=1 Tax=uncultured bacterium RepID=S6CPC8_9BACT
4-alpha-glucanotransferase
L1_008_000M1_scaffold_1_80
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


103764..104213
DNA (450bp) protein (150aa)
50S ribosomal protein L13 n=4 Tax=Bacteria RepID=RL13_BIFAA
rplM; 50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L1_008_000M1_scaffold_1_81
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


104234..104725
DNA (492bp) protein (164aa)
30S ribosomal protein S9 n=4 Tax=Bacteria RepID=RS9_BIFAA
30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L1_008_000M1_scaffold_1_82
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(104976..107423)
DNA (2448bp) protein (816aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Glycoside hydrolase family 13 n=1 Tax=uncultured bacterium RepID=S6CPU0_9BACT
glycogen debranching enzyme GlgX
L1_008_000M1_scaffold_1_83
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

107739..108140
DNA (402bp) protein (134aa)
Uncharacterized protein n=2 Tax=Bifidobacterium adolescentis RepID=A1A062_BIFAA
hypothetical protein
Glyoxalase family protein {ECO:0000313|EMBL:AII75747.1}; Uncharacterized protein {ECO:0000313|EMBL:AJE05315.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_84
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(108311..109441)
DNA (1131bp) protein (377aa)
ROK family protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A414_BIFAD
Rok family repressor
Putative repressor in the Rok (NagC/XylR) family {ECO:0000313|EMBL:AJE05316.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_85
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

109658..110926
DNA (1269bp) protein (423aa)
Transporter, major facilitator family protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A415_BIFAD
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDN83648.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
rbtT; hypothetical protein
L1_008_000M1_scaffold_1_86
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

110999..112039
DNA (1041bp) protein (347aa)
Xylitol (Sorbitol) dehydrogenase n=2 Tax=Bifidobacterium adolescentis RepID=A1A065_BIFAA
xylitol (sorbitol) dehydrogenase
GroES-like protein {ECO:0000313|EMBL:EDN83649.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L1_008_000M1_scaffold_1_87
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

112079..113050
DNA (972bp) protein (324aa)
Transcriptional regulator, AraC family n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A417_BIFAD
transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDN83650.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L1_008_000M1_scaffold_1_88
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

113404..116136
DNA (2733bp) protein (911aa)
Alcohol dehydrogenase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A067_BIFAA
bifunctional acetaldehyde-CoA/alcohol dehydrogenase
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L1_008_000M1_scaffold_1_89
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


116617..116925
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=41 Tax=Bacteria RepID=D2Q8G9_BIFDB
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1261060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis JCP7672.;"
L1_008_000M1_scaffold_1_90
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


116943..117584
DNA (642bp) protein (214aa)
50S ribosomal protein L3 n=4 Tax=root RepID=RL3_BIFAA
50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Displaying items 61-90 of 309 in total

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