ggKbase home page

L1_008_000M1_scaffold_5

Search features with annotation key words

Displaying items 121-150 of 251 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_5_121
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(168673..168909)
DNA (237bp) protein (79aa)
Glutaredoxin n=2 Tax=Bifidobacterium RepID=A7A3A6_BIFAD
Glutaredoxin-like protein NrdH
Glutaredoxin-like protein {ECO:0000313|EMBL:KFI96291.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L1_008_000M1_scaffold_5_122
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

169607..171229
DNA (1623bp) protein (541aa)
Peptidase, C69 family n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3A8_BIFAD
Dipeptidase {ECO:0000313|EMBL:KFI96292.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
pepDB; dipeptidase
L1_008_000M1_scaffold_5_123
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(171423..172454)
DNA (1032bp) protein (344aa)
Glycosyltransferase, group 2 family protein n=2 Tax=Bifidobacterium RepID=A7A3A9_BIFAD
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CCY20451.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
glycosyltransferase
L1_008_000M1_scaffold_5_124
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(172638..173513)
DNA (876bp) protein (292aa)
Transcriptional regulator, TetR family n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3B0_BIFAD
TetR family transcriptional regulator {ECO:0000313|EMBL:KIM02156.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
TetR-type transcriptional regulator
L1_008_000M1_scaffold_5_125
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

173689..173982
DNA (294bp) protein (98aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A3B2_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:CCY20456.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
hypothetical protein
L1_008_000M1_scaffold_5_126
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

173979..174152
DNA (174bp) protein (58aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A3B3_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:CCY20458.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
hypothetical protein
L1_008_000M1_scaffold_5_127
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

174334..175587
DNA (1254bp) protein (418aa)
Signal recognition particle receptor FtsY n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3B5_BIFAD
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
FtsY signal recognition particle
L1_008_000M1_scaffold_5_128
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(175674..176927)
DNA (1254bp) protein (418aa)
Transporter CPA2 family n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GSS8_9BIFI
Na(+)/H(+) antiporter
Na(+)/H(+) antiporter {ECO:0000313|EMBL:AII75549.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_5_129
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

177279..178574
DNA (1296bp) protein (432aa)
Ammonium transporter n=2 Tax=Bifidobacterium RepID=A7A3B8_BIFAD
ammonium transporter
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L1_008_000M1_scaffold_5_130
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

178576..178914
DNA (339bp) protein (113aa)
Nitrogen regulatory protein N-II n=4 Tax=Bifidobacterium RepID=A0ZZL2_BIFAA
nitrogen regulatory protein P-II
Nitrogen regulatory protein {ECO:0000313|EMBL:BAR02794.1}; Nitrogen regulatory protein P-II {ECO:0000313|EMBL:EEG71998.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
L1_008_000M1_scaffold_5_131
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

179071..180897
DNA (1827bp) protein (609aa)
Protein-pII uridylyltransferase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A0ZZL3_BIFAA
glnD; protein-PII uridylyltransferase
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|SAAS:SAAS00228994}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L1_008_000M1_scaffold_5_132
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

181285..182742
DNA (1458bp) protein (486aa)
Replicative DNA helicase {ECO:0000313|EMBL:KFI96300.1}; EC=3.6.4.12 {ECO:0000313|EMBL:KFI96300.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Replicative DNA helicase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A0ZZL4_BIFAA
replicative DNA helicase
L1_008_000M1_scaffold_5_133
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

182744..184327
DNA (1584bp) protein (528aa)
Mur ligase middle domain protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GST6_9BIFI
UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase {ECO:0000313|EMBL:KFI96301.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L1_008_000M1_scaffold_5_134
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

184393..185151
DNA (759bp) protein (253aa)
Possible cobyric acid synthase CobQ n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A0ZZL6_BIFAA
Glutamine amidotransferase {ECO:0000313|EMBL:KIM02116.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
cobyric acid synthase CobQ
L1_008_000M1_scaffold_5_135
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

185300..185539
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A3C5_BIFAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY20468.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L1_008_000M1_scaffold_5_136
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

185679..187559
DNA (1881bp) protein (627aa)
ABC1 family protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3C6_BIFAD
ABC1 family protein
ABC1 family protein {ECO:0000313|EMBL:AII75557.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_5_137
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

187818..189080
DNA (1263bp) protein (421aa)
Sortase family protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3C8_BIFAD
putative peptidoglycan bound protein
Putative peptidoglycan bound protein {ECO:0000313|EMBL:AII75558.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_5_138
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

189181..190245
DNA (1065bp) protein (355aa)
Glycerophosphodiester phosphodiesterase family protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3C9_BIFAD
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:KIM02113.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Glycerophosphoryl diester phosphodiesterase
L1_008_000M1_scaffold_5_139
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(190406..191047)
DNA (642bp) protein (214aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Uracil phosphoribosyltransferase n=3 Tax=Bifidobacterium RepID=UPP_BIFAA
uracil phosphoribosyl transferase
L1_008_000M1_scaffold_5_140
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(191401..192177)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A0ZZM3_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE05116.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_5_141
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(192179..193267)
DNA (1089bp) protein (363aa)
Hydrolase NUDIX family n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GXI5_9BIFI
MutT1 protein
MutT1 protein {ECO:0000313|EMBL:AII75562.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_5_142
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(193375..195609)
DNA (2235bp) protein (745aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
Polyphosphate kinase n=2 Tax=Bifidobacterium RepID=A7A3D4_BIFAD
polyphosphate kinase
L1_008_000M1_scaffold_5_143
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(195674..196435)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PAY4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15716.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
L1_008_000M1_scaffold_5_144
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

196501..197292
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3D7_BIFAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE05119.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_5_145
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

197273..198265
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A0ZZM7_BIFAA
hypothetical protein
Pilus assembly protein {ECO:0000313|EMBL:KIM01802.1}; Uncharacterized protein {ECO:0000313|EMBL:AJE05120.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_5_146
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

198265..199035
DNA (771bp) protein (257aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A0ZZM8_BIFAA
Flp pilus assembly protein TadB
Flp pilus assembly protein TadB {ECO:0000313|EMBL:AII75566.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_5_147
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

199032..199547
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GXJ0_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY20494.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
hypothetical protein
L1_008_000M1_scaffold_5_148
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

199814..200101
DNA (288bp) protein (96aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A0ZZN0_BIFAA
TadE like-protein
TadE like-protein {ECO:0000313|EMBL:AII75568.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_5_149
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

200104..200469
DNA (366bp) protein (122aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A0ZZN1_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY20496.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L1_008_000M1_scaffold_5_150
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

200522..200941
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H6H5_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY20497.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
Displaying items 121-150 of 251 in total

View Taxonomy