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L1_008_000M1_scaffold_5

Search features with annotation key words

Displaying items 1-30 of 251 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_5_1
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(672..3590)
DNA (2919bp) protein (973aa)
Beta-glucosidase-related glycosidase {ECO:0000313|EMBL:KFI96169.1}; EC=3.2.1.21 {ECO:0000313|EMBL:KFI96169.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Beta-glucosidase-related glycosidase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A3V9_BIFAA
Glycosyl hydrolase, family 3
L1_008_000M1_scaffold_5_2
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3842..5896
DNA (2055bp) protein (685aa)
Widely conserved protein with eukaryotic protein kinase domain n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A3W0_BIFAA
hypothetical protein
Widely conserved protein with eukaryotic protein kinase domain {ECO:0000313|EMBL:BAF40393.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L1_008_000M1_scaffold_5_3
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5953..6936
DNA (984bp) protein (328aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A2U9_BIFAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDN83232.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L1_008_000M1_scaffold_5_4
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7458..8849
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GUV5_9BIFI
hypothetical protein
G5 domain protein {ECO:0000313|EMBL:KFI96172.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L1_008_000M1_scaffold_5_5
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


8901..9812
DNA (912bp) protein (304aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=RSMA_BIFAA
dimethyladenosine transferase
L1_008_000M1_scaffold_5_6
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9809..10735
DNA (927bp) protein (309aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H3N6_9BIFI
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
L1_008_000M1_scaffold_5_7
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10797..11429
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A3W5_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF40398.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L1_008_000M1_scaffold_5_8
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11574..12992)
DNA (1419bp) protein (473aa)
Probable RNA nucleotidyltransferase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A3W6_BIFAA
tRNA adenylyltransferase
tRNA adenylyltransferase {ECO:0000313|EMBL:AII77138.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_5_9
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13077..13754
DNA (678bp) protein (226aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A1A3W7_BIFAA
hypothetical protein
Hydrolase, NUDIX family {ECO:0000313|EMBL:EDN83238.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L1_008_000M1_scaffold_5_10
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13913..15877
DNA (1965bp) protein (655aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GQ80_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY19535.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
hypothetical protein
L1_008_000M1_scaffold_5_11
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15874..17613
DNA (1740bp) protein (580aa)
Integral membrane protein MviN n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A2V8_BIFAD
conserved hypothetical membrane protein in MviN family
Conserved hypothetical membrane protein in MviN family {ECO:0000313|EMBL:AJE06786.1}; Membrane protein {ECO:0000313|EMBL:KIM02360.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_5_12
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17654..19681
DNA (2028bp) protein (676aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H3M5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY19527.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
hypothetical protein
L1_008_000M1_scaffold_5_13
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19854..20795
DNA (942bp) protein (314aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881, ECO:0000313|EMBL:KIM02362.1}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Thioredoxin reductase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A2W0_BIFAD
thioredoxin reductase
L1_008_000M1_scaffold_5_14
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20850..22136)
DNA (1287bp) protein (429aa)
ParB-like protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A2W1_BIFAD
parB-like partition protein
ParB-like partition protein {ECO:0000313|EMBL:AII77144.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_5_15
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22139..23119)
DNA (981bp) protein (327aa)
Chromosome partitioning protein ParA n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H574_9BIFI
chromosome partitioning protein ParA
Chromosome partitioning protein ParA {ECO:0000313|EMBL:AII77145.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_5_16
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23362..24096)
DNA (735bp) protein (245aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A2W3_BIFAD
16S rRNA methyltransferase GidB
L1_008_000M1_scaffold_5_17
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24174..24701)
DNA (528bp) protein (176aa)
R3H domain protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A2W4_BIFAD
R3H domain-containing protein
R3H domain-containing protein {ECO:0000313|EMBL:AII77147.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_5_18
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24846..25880)
DNA (1035bp) protein (345aa)
Membrane protein oxaA n=3 Tax=Bifidobacterium RepID=A1A3X6_BIFAA
membrane protein oxaA
Membrane protein oxaA {ECO:0000313|EMBL:BAF40409.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L1_008_000M1_scaffold_5_19
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(26595..26729)
DNA (135bp) protein (45aa)
Ribosomal protein L34 n=6 Tax=Bifidobacterium RepID=A1A3X9_BIFAA
50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L1_008_000M1_scaffold_5_20
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27092..28546
DNA (1455bp) protein (485aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H5E3_9BIFI
chromosomal replication initiator protein DnaA
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_5_21
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29042..30166
DNA (1125bp) protein (375aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
DNA polymerase III subunit beta n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A0ZZA0_BIFAA
DNA polymerase III, beta subunit
L1_008_000M1_scaffold_5_22
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30245..31456
DNA (1212bp) protein (404aa)
DNA replication and repair protein RecF n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A2X4_BIFAD
DNA replication and repair protein RecF
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_5_23
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31456..31941
DNA (486bp) protein (162aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A0ZZA2_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY20161.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L1_008_000M1_scaffold_5_24
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32222..34360
DNA (2139bp) protein (713aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
DNA gyrase subunit B n=7 Tax=root RepID=A0ZZA3_BIFAA
gyrB; DNA gyrase subunit B
L1_008_000M1_scaffold_5_25
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


34402..37116
DNA (2715bp) protein (905aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
DNA gyrase subunit A n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A2X7_BIFAD
DNA gyrase subunit A
L1_008_000M1_scaffold_5_26
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37191..37727
DNA (537bp) protein (179aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A0ZZA5_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY17950.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L1_008_000M1_scaffold_5_27
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37960..39306)
DNA (1347bp) protein (449aa)
Glutamate dehydrogenase n=2 Tax=Bifidobacterium RepID=A7A2X9_BIFAD
glutamate dehydrogenase
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_5_28
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39511..39954
DNA (444bp) protein (148aa)
Large conductance mechanosensitive channel protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A2Y1_BIFAD
Mechanosensitive ion channel protein MscL {ECO:0000313|EMBL:KIM02437.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
large-conductance mechanosensitive channel
L1_008_000M1_scaffold_5_29
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40482..41183
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GL54_9BIFI
putative metal-dependent hydrolase
Putative metal-dependent hydrolase {ECO:0000313|EMBL:AII75436.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_5_30
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41197..42537)
DNA (1341bp) protein (447aa)
Hemolysins and related proteins containing CBS domains n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GKL8_9BIFI
hemolysin-like protein containing CBS domains
Hemolysin-like protein {ECO:0000313|EMBL:KFI96199.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Displaying items 1-30 of 251 in total

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