ggKbase home page

L1_008_000M1_scaffold_24

Search features with annotation key words

Displaying items 31-60 of 254 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_24_31
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38217..39266
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP21679.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_008_000M1_scaffold_24_32
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39298..40140
DNA (843bp) protein (281aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KC00_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL02363.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_24_33
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40338..41330
DNA (993bp) protein (331aa)
Transcriptional regulators n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KC01_9FIRM
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CBL02364.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_24_34
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41345..42187
DNA (843bp) protein (281aa)
HAD hydrolase, family IIB n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAY0_9FIRM
HAD hydrolase, family IIB {ECO:0000313|EMBL:EDP21682.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
HAD-superfamily hydrolase, subfamily IIB
L1_008_000M1_scaffold_24_35
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42329..42781)
DNA (453bp) protein (151aa)
S-ribosylhomocysteine lyase {ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|SAAS:SAAS00059628};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
LuxS protein involved in autoinducer AI2 synthesis (EC:4.4.1.21)
S-ribosylhomocysteinase LuxS n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAY1_9FIRM
L1_008_000M1_scaffold_24_36
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42799..44682)
DNA (1884bp) protein (628aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAY2_9FIRM
L1_008_000M1_scaffold_24_37
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44972..46150
DNA (1179bp) protein (393aa)
phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Phosphopentomutase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KC05_9FIRM
L1_008_000M1_scaffold_24_38
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46189..47508
DNA (1320bp) protein (440aa)
thymidine phosphorylase (EC:2.4.2.2 2.4.2.4)
Thymidine phosphorylase {ECO:0000313|EMBL:CBL02369.1}; EC=2.4.2.2 {ECO:0000313|EMBL:CBL02369.1};; EC=2.4.2.4 {ECO:0000313|EMBL:CBL02369.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Thymidine phosphorylase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KC06_9FIRM
L1_008_000M1_scaffold_24_39
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47863..49215
DNA (1353bp) protein (451aa)
K+ transport systems, NAD-binding component n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KC07_9FIRM
K+ transport systems, NAD-binding component
K+ transport systems, NAD-binding component {ECO:0000313|EMBL:CBL02370.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_24_40
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

49228..50670
DNA (1443bp) protein (481aa)
Cation transport protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAY8_9FIRM
Cation transport protein {ECO:0000313|EMBL:EDP21689.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Trk-type K+ transport systems, membrane components
L1_008_000M1_scaffold_24_41
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50942..52339
DNA (1398bp) protein (466aa)
Putative virion core protein (Lumpy skin disease virus) n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KC10_9FIRM
Putative virion core protein (lumpy skin disease virus)
Putative virion core protein (Lumpy skin disease virus) {ECO:0000313|EMBL:CBL02373.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_24_42
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

52429..53520
DNA (1092bp) protein (364aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KC11_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL02374.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_24_43
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

53535..54380
DNA (846bp) protein (282aa)
Beta-propeller domains of methanol dehydrogenase type n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KC12_9FIRM
Beta-propeller domains of methanol dehydrogenase type
Beta-propeller domains of methanol dehydrogenase type {ECO:0000313|EMBL:CBL02375.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_24_44
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

54566..56863
DNA (2298bp) protein (766aa)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAZ3_9FIRM
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:EDP21694.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
ATPases with chaperone activity, ATP-binding subunit
L1_008_000M1_scaffold_24_45
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

56943..57926
DNA (984bp) protein (328aa)
Lipid kinase, YegS/Rv2252/BmrU family {ECO:0000313|EMBL:EDP21695.1}; EC=2.7.1.- {ECO:0000313|EMBL:EDP21695.1};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Lipid kinase, YegS/Rv2252/BmrU family n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAZ4_9FIRM
conserved protein of unknown function cotranscribed with Bmr (bmrU)
L1_008_000M1_scaffold_24_46
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(57995..59221)
DNA (1227bp) protein (409aa)
Acyltransferase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAZ5_9FIRM
Acyltransferase {ECO:0000313|EMBL:EDP21696.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
acyltransferase family protein
L1_008_000M1_scaffold_24_47
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(59547..60299)
DNA (753bp) protein (251aa)
3-dehydroquinate dehydratase, type I (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214, ECO:0000313|EMBL:CBL02378.1};; Type I DHQase {ECO:0000256|HAMAP-Rule:MF_00214}; Type I dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
3-dehydroquinate dehydratase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KC15_9FIRM
L1_008_000M1_scaffold_24_48
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(60363..61010)
DNA (648bp) protein (216aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KC16_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL02379.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_24_49
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(61023..61343)
DNA (321bp) protein (107aa)
Phage holin protein (Holin_LLH) n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KC17_9FIRM
Phage holin protein (Holin_LLH).
Phage holin protein (Holin_LLH) {ECO:0000313|EMBL:CBL02380.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_24_50
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(61406..61912)
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KC18_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL02381.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_24_51
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(62085..62543)
DNA (459bp) protein (153aa)
Predicted membrane protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KC19_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBL02382.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_24_52
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(62540..63163)
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KC20_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL02383.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_24_53
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(63189..65447)
DNA (2259bp) protein (753aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KC21_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL02384.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_24_54
Eggerthella sp. CAG:1427, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(65479..66522)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:1427 RepID=R5FP44_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCY06628.1}; TaxID=1262874 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:1427.;"
hypothetical protein
L1_008_000M1_scaffold_24_55
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(66535..67002)
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KC24_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL02387.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_24_56
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(67072..68178)
DNA (1107bp) protein (369aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KC25_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL02388.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_24_57
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(68193..68555)
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KC26_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL02389.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_24_58
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(68582..69217)
DNA (636bp) protein (212aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KC27_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL02390.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_24_59
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(69219..69368)
DNA (150bp) protein (50aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KC28_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL02391.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_24_60
Eggerthella sp. CAG:1427, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(69368..69682)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:1427 RepID=R5G103_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCY06622.1}; TaxID=1262874 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:1427.;"
Displaying items 31-60 of 254 in total

View Taxonomy