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L1_008_000M1_scaffold_24

Search features with annotation key words

Displaying items 1-30 of 254 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_24_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..1283)
DNA (1281bp) protein (427aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hydroxylamine reductase (EC:1.7.-.-)
Hydroxylamine reductase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAT4_9FIRM
L1_008_000M1_scaffold_24_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1408..2760)
DNA (1353bp) protein (451aa)
glutamate dehydrogenase (NADP) (EC:1.4.1.4)
Glutamate dehydrogenase n=2 Tax=Faecalibacterium prausnitzii RepID=D4KBX4_9FIRM
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_008_000M1_scaffold_24_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3155..3988)
DNA (834bp) protein (278aa)
ATPases involved in chromosome partitioning n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KBX5_9FIRM
ATPases involved in chromosome partitioning
ATPases involved in chromosome partitioning {ECO:0000313|EMBL:CBL02338.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_24_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4197..5762
DNA (1566bp) protein (522aa)
Polysaccharide biosynthesis protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAU1_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EDP21649.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Membrane protein involved in the export of O-antigen and teichoic acid
L1_008_000M1_scaffold_24_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5913..7811
DNA (1899bp) protein (633aa)
Polysaccharide biosynthesis protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAU3_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EDP21650.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
exopolysaccharide biosynthesis protein
L1_008_000M1_scaffold_24_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7896..9182
DNA (1287bp) protein (429aa)
Diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase {ECO:0000313|EMBL:CBL02339.1}; EC=4.1.1.20 {ECO:0000313|EMBL:CBL02339.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Diaminopimelate decarboxylase n=2 Tax=Faecalibacterium prausnitzii RepID=D4KBX6_9FIRM
L1_008_000M1_scaffold_24_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9223..9621
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP21652.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L1_008_000M1_scaffold_24_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9720..10625)
DNA (906bp) protein (302aa)
SPFH/Band 7/PHB domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAU6_9FIRM
SPFH/Band 7/PHB domain protein {ECO:0000313|EMBL:EDP21653.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Membrane protease subunits, stomatin/prohibitin homologs
L1_008_000M1_scaffold_24_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10641..11102)
DNA (462bp) protein (154aa)
Nodulation efficiency protein D n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAU7_9FIRM
Nodulation efficiency protein D {ECO:0000313|EMBL:EDP21654.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Membrane protein implicated in regulation of membrane protease activity
L1_008_000M1_scaffold_24_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11364..13220)
DNA (1857bp) protein (619aa)
Alpha amylase, catalytic domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAV0_9FIRM
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EDP21656.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Glycosidases
L1_008_000M1_scaffold_24_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13295..15700)
DNA (2406bp) protein (802aa)
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587, ECO:0000313|EMBL:CBL02343.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Phosphorylase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KBY0_9FIRM
L1_008_000M1_scaffold_24_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16127..16591
DNA (465bp) protein (155aa)
Cell division protein ZapA n=2 Tax=Faecalibacterium prausnitzii RepID=D4KBY1_9FIRM
Cell division protein ZapA.
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_008_000M1_scaffold_24_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16628..18697
DNA (2070bp) protein (690aa)
Peptidase, U32 family {ECO:0000313|EMBL:EDP21659.1}; EC=3.4.-.- {ECO:0000313|EMBL:EDP21659.1};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Collagenase and related proteases (EC:3.4.-.-)
Peptidase, U32 family n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAV3_9FIRM
L1_008_000M1_scaffold_24_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18761..19207
DNA (447bp) protein (149aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Faecalibacterium prausnitzii RepID=D4KBY3_9FIRM
L1_008_000M1_scaffold_24_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19329..19886
DNA (558bp) protein (186aa)
Maf-like protein maf n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAV5_9FIRM
MAF protein
Maf-like protein maf {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_008_000M1_scaffold_24_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20049..21071
DNA (1023bp) protein (341aa)
Rod shape-determining protein MreB n=2 Tax=Faecalibacterium prausnitzii RepID=D4KBY5_9FIRM
rod shape-determining protein MreB
Cell shape determining protein, MreB/Mrl family {ECO:0000313|EMBL:EDP21662.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_008_000M1_scaffold_24_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21246..22076
DNA (831bp) protein (277aa)
Cell shape-determining protein MreC n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZGW0_9FIRM
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Cell shape-determining protein
L1_008_000M1_scaffold_24_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22092..22625
DNA (534bp) protein (178aa)
Rod shape-determining protein MreD n=2 Tax=Faecalibacterium prausnitzii RepID=D4KBY7_9FIRM
rod shape-determining protein MreD.
Rod shape-determining protein MreD {ECO:0000313|EMBL:CBL02350.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_24_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22645..24882
DNA (2238bp) protein (746aa)
Cell division protein FtsI/penicillin-binding protein 2 n=2 Tax=Faecalibacterium prausnitzii RepID=D4KBY8_9FIRM
Cell division protein FtsI/penicillin-binding protein 2
Cell division protein FtsI/penicillin-binding protein 2 {ECO:0000313|EMBL:CBL02351.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_24_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25040..25444
DNA (405bp) protein (135aa)
methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Methylglyoxal synthase n=2 Tax=Faecalibacterium prausnitzii RepID=D4KBY9_9FIRM
L1_008_000M1_scaffold_24_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25512..26054)
DNA (543bp) protein (181aa)
Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain n=2 Tax=Faecalibacterium prausnitzii RepID=D4KBZ0_9FIRM
Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain
Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain {ECO:0000313|EMBL:CBL02353.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_24_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26051..26515)
DNA (465bp) protein (155aa)
RNase HI (EC:3.1.26.4)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Ribonuclease H n=2 Tax=Faecalibacterium prausnitzii RepID=D4KBZ1_9FIRM
L1_008_000M1_scaffold_24_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26919..28748
DNA (1830bp) protein (610aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KBZ3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL02356.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_24_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28797..30794
DNA (1998bp) protein (666aa)
Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KBZ4_9FIRM
Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain
Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain {ECO:0000313|EMBL:CBL02357.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_24_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30799..31902
DNA (1104bp) protein (368aa)
UDP-galactopyranose mutase {ECO:0000313|EMBL:EDP21673.1}; EC=5.4.99.9 {ECO:0000313|EMBL:EDP21673.1};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
UDP-galactopyranose mutase (EC:5.4.99.9)
UDP-galactopyranose mutase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAW9_9FIRM
L1_008_000M1_scaffold_24_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


32105..32560
DNA (456bp) protein (152aa)
50S ribosomal protein L9 n=2 Tax=Faecalibacterium prausnitzii RepID=D4KBZ6_9FIRM
LSU ribosomal protein L9P
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_24_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32647..34047
DNA (1401bp) protein (467aa)
primary replicative DNA helicase (EC:3.6.1.-)
Primary replicative DNA helicase {ECO:0000313|EMBL:CBL02360.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBL02360.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Primary replicative DNA helicase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KBZ7_9FIRM
L1_008_000M1_scaffold_24_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34047..35483
DNA (1437bp) protein (479aa)
tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KBZ8_9FIRM
L1_008_000M1_scaffold_24_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35467..36015
DNA (549bp) protein (183aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CBL02362.1}; EC=2.4.2.8 {ECO:0000313|EMBL:CBL02362.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Hypoxanthine phosphoribosyltransferase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KBZ9_9FIRM
L1_008_000M1_scaffold_24_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36055..38190
DNA (2136bp) protein (712aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAX5_9FIRM
Displaying items 1-30 of 254 in total

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