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L1_008_000M1_scaffold_27

Search features with annotation key words

Displaying items 31-60 of 207 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_27_31
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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26162..27331
DNA (1170bp) protein (390aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IPX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS23846.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
L1_008_000M1_scaffold_27_32
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27473..28909
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6ND16_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC10043.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
propionyl-CoA carboxylase
L1_008_000M1_scaffold_27_33
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28914..29627
DNA (714bp) protein (238aa)
Oxaloacetate decarboxylase gamma chain {ECO:0000256|RuleBase:RU004278}; EC=4.1.1.3 {ECO:0000256|RuleBase:RU004278};; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
Oxaloacetate decarboxylase gamma chain n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IPK5_9FIRM
hypothetical protein
L1_008_000M1_scaffold_27_34
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29652..30011
DNA (360bp) protein (120aa)
Biotin carboxyl carrier protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NUY9_9FIRM
Biotin carboxyl carrier protein {ECO:0000313|EMBL:CDC10046.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
pyruvate carboxylase subunit B
L1_008_000M1_scaffold_27_35
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30032..31180
DNA (1149bp) protein (383aa)
Sodium ion-translocating decarboxylase beta subunit n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z8B7_9FIRM
Sodium ion-translocating decarboxylase beta subunit {ECO:0000313|EMBL:CDC10047.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
sodium ion-translocating decarboxylase subunit beta
L1_008_000M1_scaffold_27_36
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31193..32611
DNA (1419bp) protein (473aa)
Oxaloacetate decarboxylase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T318_ROSHA
oxaloacetate decarboxylase
Oxaloacetate decarboxylase {ECO:0000313|EMBL:AEN96794.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_008_000M1_scaffold_27_37
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32752..33678
DNA (927bp) protein (309aa)
N-acetylmannosamine kinase n=1 Tax=Roseburia sp. CAG:45 RepID=R6ND25_9FIRM
N-acetylmannosamine kinase {ECO:0000313|EMBL:CDC10053.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
N-acetylmannosamine kinase
L1_008_000M1_scaffold_27_38
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33671..34903
DNA (1233bp) protein (411aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KXS0_9FIRM
conserved hypothetical protein TIGR00275
Uncharacterized protein {ECO:0000313|EMBL:CBL09206.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000M1_scaffold_27_39
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35043..35714
DNA (672bp) protein (224aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
Cytidylate kinase n=1 Tax=Roseburia sp. CAG:45 RepID=R6PJY6_9FIRM
cytidylate kinase
L1_008_000M1_scaffold_27_40
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35711..36562
DNA (852bp) protein (284aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HLN3_9FIRM
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
L1_008_000M1_scaffold_27_41
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


36543..37673
DNA (1131bp) protein (377aa)
Ribosomal protein S1 n=3 Tax=Roseburia RepID=D4KXR7_9FIRM
Ribosomal protein S1
Ribosomal protein S1 {ECO:0000313|EMBL:CBL12157.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_27_42
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37690..38466
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7QXL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF42959.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
CheR-type MCP methyltransferase
L1_008_000M1_scaffold_27_43
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38628..39728)
DNA (1101bp) protein (367aa)
Possible elongation subunit of DNA-dependent DNA polymerase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YDT8_9FIRM
Possible elongation subunit of DNA-dependent DNA polymerase {ECO:0000313|EMBL:CDA25005.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
DNA polymerase family B, exonuclease domain.
L1_008_000M1_scaffold_27_44
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39952..41274
DNA (1323bp) protein (441aa)
Electron transport complex, rnfabcdge type, C subunit n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IPT6_9FIRM
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
rnfC/nqrF
L1_008_000M1_scaffold_27_45
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41291..42232
DNA (942bp) protein (314aa)
Electron transport complex protein RnfD n=1 Tax=Eubacterium sp. 14-2 RepID=S0JJP5_9FIRM
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
electron transport complex, RnfABCDGE type, C subunit/electron transport complex, RnfABCDGE type, D subunit
L1_008_000M1_scaffold_27_46
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42225..42836
DNA (612bp) protein (204aa)
Electron transport complex, rnfabcdge type, G subunit n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KE72_9FIRM
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
rnfG/nqrC
L1_008_000M1_scaffold_27_47
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42839..43528
DNA (690bp) protein (230aa)
Electron transport complex, rnfabcdge type, E subunit n=1 Tax=Eubacterium sp. 14-2 RepID=S0JH92_9FIRM
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
rnfE/nqrD
L1_008_000M1_scaffold_27_48
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43529..44104
DNA (576bp) protein (192aa)
Electron transport complex, rnfabcdge type, A subunit n=1 Tax=Eubacterium sp. 14-2 RepID=S0J302_9FIRM
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
electron transport complex, RnfABCDGE type, A subunit
L1_008_000M1_scaffold_27_49
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44117..44908
DNA (792bp) protein (264aa)
Ferredoxin n=1 Tax=Roseburia sp. CAG:182 RepID=R7QZD1_9FIRM
Ferredoxin {ECO:0000313|EMBL:CDF42993.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
ferredoxin
L1_008_000M1_scaffold_27_50
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

45014..46405
DNA (1392bp) protein (464aa)
Putative efflux protein MATE family n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SBR9_9FIRM
Putative efflux protein MATE family {ECO:0000313|EMBL:CDC44032.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
MATE efflux family protein
L1_008_000M1_scaffold_27_51
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46402..47397)
DNA (996bp) protein (332aa)
Putative thiamine biosynthesis protein ApbE n=1 Tax=Roseburia sp. CAG:182 RepID=R7R0E9_9FIRM
Putative thiamine biosynthesis protein ApbE {ECO:0000313|EMBL:CDF42995.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
thiamine biosynthesis lipoprotein
L1_008_000M1_scaffold_27_52
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

48260..49231
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KFH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35053.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L1_008_000M1_scaffold_27_53
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

49986..50831
DNA (846bp) protein (282aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase n=1 Tax=Roseburia sp. CAG:45 RepID=R6NP28_9FIRM
L1_008_000M1_scaffold_27_54
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

50844..51065
DNA (222bp) protein (74aa)
UPF0291 protein BN537_01676 n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XPD1_9FIRM
UPF0291 protein BN537_01676 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
hypothetical protein
L1_008_000M1_scaffold_27_55
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

51043..51606
DNA (564bp) protein (188aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
5,10-methenyltetrahydrofolate synthetase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2BHJ8_9FIRM
L1_008_000M1_scaffold_27_56
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

51620..52870
DNA (1251bp) protein (417aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Roseburia sp. CAG:182 RepID=R7QXT2_9FIRM
L1_008_000M1_scaffold_27_57
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

52943..54397
DNA (1455bp) protein (485aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FP71_9FIRM
tRNA-i(6)A37 thiotransferase protein MiaB
L1_008_000M1_scaffold_27_58
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

54401..54790
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7R000_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF43001.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
hypothetical protein
L1_008_000M1_scaffold_27_59
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

54800..55294
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T2Z6_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN96772.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_008_000M1_scaffold_27_60
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

55314..55928
DNA (615bp) protein (205aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KX75_9FIRM
Holliday junction DNA helicase subunit RuvA
Displaying items 31-60 of 207 in total

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