ggKbase home page

L1_008_000M1_scaffold_54

Search features with annotation key words

Displaying items 1-30 of 183 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_54_1
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

225..3539
DNA (3315bp) protein (1105aa)
CRISPR-associated protein, Csn1 family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZW1_9FIRM
CRISPR-associated protein, Csn1 family {ECO:0000313|EMBL:EDS75958.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
CRISPR-associated protein Cas9/Csn1
L1_008_000M1_scaffold_54_2
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3642..4535
DNA (894bp) protein (298aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8N5_9FIRM
CRISPR-associated protein Cas1
L1_008_000M1_scaffold_54_3
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4495..4848
DNA (354bp) protein (118aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZW3_9FIRM
predicted virulence-associated protein D / CRISPR associated protein Cas2
L1_008_000M1_scaffold_54_4
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4845..5678
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QVP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25072.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_008_000M1_scaffold_54_5
unknown

Not on your lists

comp(5684..5938)
DNA (255bp) protein (85aa)

This feature has no annotations

L1_008_000M1_scaffold_54_6
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6702..7838
DNA (1137bp) protein (379aa)
Uncharacterized protein (Fragment) n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NWI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF92422.1}; Flags: Fragment;; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
integrase catalytic subunit
L1_008_000M1_scaffold_54_7
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8008..8496)
DNA (489bp) protein (163aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Phosphodiesterase family protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5F1_9FIRM
phosphoesterase, MJ0936 family
L1_008_000M1_scaffold_54_8
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8512..9417)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QCG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23984.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_54_9
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9529..9678
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q623_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23983.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_54_10
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9675..10595
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QSN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23982.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_008_000M1_scaffold_54_11
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10672..11955
DNA (1284bp) protein (428aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
tig; trigger factor (EC:5.2.1.8)
Trigger factor n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QP49_9FIRM
L1_008_000M1_scaffold_54_12
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11999..14320
DNA (2322bp) protein (774aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Lon protease n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5E7_9FIRM
lon; ATP-dependent protease La
L1_008_000M1_scaffold_54_13
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14373..14972
DNA (600bp) protein (200aa)
Probable GTP-binding protein EngB n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QCF6_9FIRM
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321, ECO:0000256|SAAS:SAAS00023450}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
GTPase
L1_008_000M1_scaffold_54_14
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15034..15723
DNA (690bp) protein (230aa)
Putative stage VI sporulation protein D n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q616_9FIRM
Putative stage VI sporulation protein D {ECO:0000313|EMBL:CCZ23978.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_54_15
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15665..16612
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QSM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23977.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_54_16
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16868..17542
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QP45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23976.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_54_17
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


17520..20141
DNA (2622bp) protein (874aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Valine--tRNA ligase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5E2_9FIRM
valyl-tRNA synthetase
L1_008_000M1_scaffold_54_18
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20267..20425
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QCF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23974.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_54_19
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20493..20876
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q611_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23973.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_54_20
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20961..21428
DNA (468bp) protein (156aa)
BioY family protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QSL9_9FIRM
BioY family protein {ECO:0000313|EMBL:CCZ23972.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
bioY; bioY protein
L1_008_000M1_scaffold_54_21
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21429..22112
DNA (684bp) protein (228aa)
DNA repair protein RadC n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QP40_9FIRM
DNA repair protein RadC {ECO:0000313|EMBL:CCZ23971.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
DNA repair protein RadC
L1_008_000M1_scaffold_54_22
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22136..23017
DNA (882bp) protein (294aa)
Cell shape-determining protein MreC n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5D8_9FIRM
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
rod shape-determining protein MreC
L1_008_000M1_scaffold_54_23
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23007..23531
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QCE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23969.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
mreD; rod shape-determining protein MreD
L1_008_000M1_scaffold_54_24
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23515..24090
DNA (576bp) protein (192aa)
Putative septum site-determining protein MinC n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q604_9FIRM
Putative septum site-determining protein MinC {ECO:0000313|EMBL:CCZ23968.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_54_25
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24083..24862
DNA (780bp) protein (260aa)
Site-determining protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QSL3_9FIRM
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
septum site-determining protein MinD
L1_008_000M1_scaffold_54_26
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24859..25425
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QP36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23966.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_54_27
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25427..26131
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5D4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23965.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
stage IV sporulation protein FB
L1_008_000M1_scaffold_54_28
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


26260..26571
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QCE0_9FIRM
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
50S ribosomal protein L21
L1_008_000M1_scaffold_54_29
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26571..26894
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5Z8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23963.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_008_000M1_scaffold_54_30
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


26899..27183
DNA (285bp) protein (95aa)
50S ribosomal protein L27 n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QSK5_9FIRM
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
50S ribosomal protein L27
Displaying items 1-30 of 183 in total

View Taxonomy