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L1_008_000M1_scaffold_63

Search features with annotation key words

Displaying items 1-30 of 149 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_63_1
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..180)
DNA (180bp) protein (60aa)
TetR family Bacterial regulatory protein n=2 Tax=Lachnospiraceae RepID=E5VGR3_9FIRM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EKY19556.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
transcriptional regulator, TetR family
L1_008_000M1_scaffold_63_2
unknown

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comp(272..757)
DNA (486bp) protein (162aa)
Predicted transcriptional regulators n=2 Tax=Clostridiales RepID=D4MZ82_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBL37927.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_63_3
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(700..858)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EVN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG36658.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Predicted transcriptional regulators
L1_008_000M1_scaffold_63_4
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1054..1743)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EVN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG36657.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
AraC family transcriptional regulator
L1_008_000M1_scaffold_63_5
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1867..2802)
DNA (936bp) protein (312aa)
Elongation factor Ts n=2 Tax=Eubacterium RepID=C0EVN6_9FIRM
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
translation elongation factor Ts (EF-Ts)
L1_008_000M1_scaffold_63_6
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2908..3639)
DNA (732bp) protein (244aa)
30S ribosomal protein S2 n=3 Tax=Eubacterium RepID=C0EVN5_9FIRM
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
SSU ribosomal protein S2P
L1_008_000M1_scaffold_63_7
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4033..5823)
DNA (1791bp) protein (597aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GCT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB19399.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Protein of unknown function DUF2081
L1_008_000M1_scaffold_63_8
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6012..6782)
DNA (771bp) protein (257aa)
GTP-sensing transcriptional pleiotropic repressor CodY n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G1Q4_9FIRM
GTP-sensing transcriptional pleiotropic repressor CodY {ECO:0000256|HAMAP-Rule:MF_00621, ECO:0000256|SAAS:SAAS00044533}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
GTP-sensing transcriptional pleiotropic repressor CodY
L1_008_000M1_scaffold_63_9
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7069..9144)
DNA (2076bp) protein (692aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=2 Tax=Eubacterium RepID=C0EVN2_9FIRM
L1_008_000M1_scaffold_63_10
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9445..10566)
DNA (1122bp) protein (374aa)
DNA protecting protein DprA n=2 Tax=Eubacterium RepID=C0EVN1_9FIRM
DNA protecting protein DprA {ECO:0000313|EMBL:CDB19396.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
DNA processing protein
L1_008_000M1_scaffold_63_11
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10563..12227)
DNA (1665bp) protein (555aa)
putative magnesium chelatase (EC:6.6.1.1)
Mg chelatase-like protein n=2 Tax=Eubacterium RepID=C0EVN0_9FIRM
Mg chelatase-like protein {ECO:0000313|EMBL:CDB19395.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
L1_008_000M1_scaffold_63_12
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12656..13114)
DNA (459bp) protein (153aa)
Transcriptional repressor NrdR n=2 Tax=Eubacterium RepID=C0EVU9_9FIRM
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
nrdR; transcriptional regulator NrdR
L1_008_000M1_scaffold_63_13
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13185..13436)
DNA (252bp) protein (84aa)
Sporulation protein, YlmC/YmxH family n=2 Tax=Eubacterium RepID=C0EVU8_9FIRM
Sporulation protein YlmC/YmxH family {ECO:0000313|EMBL:CDB17699.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
sporulation protein, YlmC/YmxH family
L1_008_000M1_scaffold_63_14
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13731..14672)
DNA (942bp) protein (314aa)
Hydrolase, alpha/beta domain protein n=2 Tax=Eubacterium RepID=C0EVU7_9FIRM
Hydrolase alpha/beta domain protein {ECO:0000313|EMBL:CDB17698.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Lysophospholipase
L1_008_000M1_scaffold_63_15
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14982..15773)
DNA (792bp) protein (264aa)
Electron transport complex, RnfABCDGE type, B subunit n=2 Tax=Eubacterium RepID=C0EVU6_9FIRM
Electron transport complex RnfABCDGE type B subunit {ECO:0000313|EMBL:CDB17697.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
electron transport complex, RnfABCDGE type, B subunit
L1_008_000M1_scaffold_63_16
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15789..16364)
DNA (576bp) protein (192aa)
Putative NADH:ubiquinone oxidoreductase, E subunit n=2 Tax=Eubacterium RepID=C0EVU5_9FIRM
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
RnfABCDGE type electron transport complex subunit A
L1_008_000M1_scaffold_63_17
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16379..17137)
DNA (759bp) protein (253aa)
Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Eubacterium RepID=C0EVU4_9FIRM
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
electron transport complex, RnfABCDGE type, E subunit
L1_008_000M1_scaffold_63_18
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17139..17768)
DNA (630bp) protein (210aa)
Electron transport complex, RnfABCDGE type, G subunit n=2 Tax=Eubacterium RepID=C0EVU3_9FIRM
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
electron transport complex, RnfABCDGE type, G subunit
L1_008_000M1_scaffold_63_19
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17768..18721)
DNA (954bp) protein (318aa)
Electron transport complex RnfABCDGE type D subunit n=1 Tax=Eubacterium hallii CAG:12 RepID=R6FWV1_9FIRM
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
electron transport complex, RnfABCDGE type, D subunit
L1_008_000M1_scaffold_63_20
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18742..20055)
DNA (1314bp) protein (438aa)
Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=Eubacterium RepID=C0EVU1_9FIRM
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
electron transport complex, RnfABCDGE type, C subunit
L1_008_000M1_scaffold_63_21
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20380..20787)
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C0EVU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG36634.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
hypothetical protein
L1_008_000M1_scaffold_63_22
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20759..21781)
DNA (1023bp) protein (341aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EEG36633.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEG36633.1};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EVT9_9FIRM
glycosyltransferase
L1_008_000M1_scaffold_63_23
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21969..23258)
DNA (1290bp) protein (430aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
adenylosuccinate synthase (EC:6.3.4.4)
Adenylosuccinate synthetase n=2 Tax=Eubacterium RepID=C0EVT8_9FIRM
L1_008_000M1_scaffold_63_24
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23367..25037)
DNA (1671bp) protein (557aa)
Polysaccharide biosynthesis protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EVT7_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EEG36631.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Membrane protein involved in the export of O-antigen and teichoic acid
L1_008_000M1_scaffold_63_25
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25179..26612)
DNA (1434bp) protein (478aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=2 Tax=Eubacterium RepID=C0EVT6_9FIRM
L1_008_000M1_scaffold_63_26
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26730..28184)
DNA (1455bp) protein (485aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Amidophosphoribosyltransferase n=2 Tax=Eubacterium RepID=C0EVT5_9FIRM
amidophosphoribosyltransferase
L1_008_000M1_scaffold_63_27
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28335..29564)
DNA (1230bp) protein (410aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EVT4_9FIRM
glycoside hydrolase
L1_008_000M1_scaffold_63_28
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29564..31714)
DNA (2151bp) protein (717aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G823_9FIRM
L1_008_000M1_scaffold_63_29
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31728..33263)
DNA (1536bp) protein (512aa)
Exopolyphosphatase (EC:3.6.1.11)
HD domain protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EVT2_9FIRM
HD domain protein {ECO:0000313|EMBL:EEG36626.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
L1_008_000M1_scaffold_63_30
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33303..35795)
DNA (2493bp) protein (831aa)
Arylsulfatase {ECO:0000313|EMBL:EEG36625.1}; EC=3.1.6.- {ECO:0000313|EMBL:EEG36625.1};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Arylsulfatase n=2 Tax=Eubacterium RepID=C0EVT1_9FIRM
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
Displaying items 1-30 of 149 in total

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