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L1_008_000M1_scaffold_76

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Displaying items 1-30 of 130 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_76_1
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(146..835)
DNA (690bp) protein (230aa)
Response regulator receiver domain protein n=2 Tax=Dorea RepID=A6BF13_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDM63600.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_008_000M1_scaffold_76_2
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(828..2321)
DNA (1494bp) protein (498aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BF14_9FIRM
Signal transduction histidine kinase
L1_008_000M1_scaffold_76_3
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2404..3591)
DNA (1188bp) protein (396aa)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FUN4_9FIRM
L1_008_000M1_scaffold_76_4
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3947..5239)
DNA (1293bp) protein (431aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=2 Tax=Dorea RepID=A6BF17_9FIRM
L1_008_000M1_scaffold_76_5
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5520..6023)
DNA (504bp) protein (168aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BF18_9FIRM
L1_008_000M1_scaffold_76_6
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6144..6500)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BF19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM63606.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L1_008_000M1_scaffold_76_7
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6582..8018)
DNA (1437bp) protein (479aa)
sucrose-6-phosphate hydrolase (EC:3.2.1.26)
Sucrose-6-phosphate hydrolase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FUP0_9FIRM
Sucrose-6-phosphate hydrolase {ECO:0000313|EMBL:CDE18565.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_76_8
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8043..9137)
DNA (1095bp) protein (365aa)
ABC transporter, ATP-binding protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BF21_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM63608.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
sugar ABC transporter, ATP-binding protein
L1_008_000M1_scaffold_76_9
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9141..9992)
DNA (852bp) protein (284aa)
Putative transmembrane permease MsmG n=2 Tax=Dorea RepID=A6BF22_9FIRM
Putative transmembrane permease MsmG {ECO:0000313|EMBL:CDE18569.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L1_008_000M1_scaffold_76_10
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9964..10863)
DNA (900bp) protein (300aa)
Transmembrane permease MsmF n=2 Tax=Dorea RepID=A6BF23_9FIRM
Transmembrane permease MsmF {ECO:0000313|EMBL:CDE18570.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
ABC transporter membrane-spanning permease - sugar transporter
L1_008_000M1_scaffold_76_11
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10863..12185)
DNA (1323bp) protein (441aa)
ABC transporter solute-binding protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FV80_9FIRM
ABC transporter solute-binding protein {ECO:0000313|EMBL:CDE18571.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
ABC transporter substrate-binding protein - sugar transport
L1_008_000M1_scaffold_76_12
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12386..13411
DNA (1026bp) protein (342aa)
Putative ribose operon repressor n=2 Tax=Dorea RepID=A6BF25_9FIRM
Putative ribose operon repressor {ECO:0000313|EMBL:CDE18572.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
transcriptional regulator, LacI family
L1_008_000M1_scaffold_76_13
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13483..14496)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BF26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM63613.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L1_008_000M1_scaffold_76_14
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14737..15126)
DNA (390bp) protein (130aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BF27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE18574.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_76_15
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15299..16024)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MAV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS67958.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
ABC transporter ATP-binding protein
L1_008_000M1_scaffold_76_16
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16015..17892)
DNA (1878bp) protein (626aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MJF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS67957.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
L1_008_000M1_scaffold_76_17
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17932..18570)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FYB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE19503.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_76_18
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18574..18900)
DNA (327bp) protein (109aa)
Transcriptional regulator PadR family n=1 Tax=Dorea longicatena CAG:42 RepID=R7G0K1_9FIRM
Transcriptional regulator PadR family {ECO:0000313|EMBL:CDE19502.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
PadR-like family transcriptional regulator
L1_008_000M1_scaffold_76_19
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19097..19756)
DNA (660bp) protein (220aa)
H(+)-transporting ATP synthase, vacuolar type, subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D n=1 Tax=Dorea longicatena CAG:42 RepID=R7FX90_9FIRM
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_76_20
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19819..21192)
DNA (1374bp) protein (458aa)
Archaeal/vacuolar-type H+-ATPase subunit B (EC:3.6.3.14)
V-type ATP synthase beta chain n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BF32_9FIRM
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L1_008_000M1_scaffold_76_21
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21196..22962)
DNA (1767bp) protein (589aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Archaeal/vacuolar-type H+-ATPase subunit A (EC:3.6.3.14)
V-type ATP synthase alpha chain n=1 Tax=Dorea longicatena CAG:42 RepID=R7FY87_9FIRM
L1_008_000M1_scaffold_76_22
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22982..23299)
DNA (318bp) protein (106aa)
ATP synthase, subunit F n=2 Tax=Dorea RepID=A6BF34_9FIRM
ATP synthase subunit F {ECO:0000313|EMBL:CDE19476.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_76_23
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23292..24260)
DNA (969bp) protein (323aa)
Archaeal/vacuolar-type H+-ATPase subunit C (EC:3.6.3.14)
Putative ATP synthase, subunit C n=2 Tax=Dorea RepID=A6BF35_9FIRM
Putative ATP synthase subunit C {ECO:0000313|EMBL:CDE19474.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_76_24
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24330..24926)
DNA (597bp) protein (199aa)
Putative ATP synthase, subunit E n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BF36_9FIRM
Putative ATP synthase, subunit E {ECO:0000313|EMBL:EDM63623.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L1_008_000M1_scaffold_76_25
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24944..25429)
DNA (486bp) protein (162aa)
ATP synthase subunit C. (EC:3.6.3.14)
ATP synthase subunit C n=2 Tax=Dorea RepID=A6BF37_9FIRM
ATP synthase subunit C {ECO:0000313|EMBL:EDM63624.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L1_008_000M1_scaffold_76_26
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25432..27447)
DNA (2016bp) protein (672aa)
Archaeal/vacuolar-type H+-ATPase subunit I (EC:3.6.3.14)
Putative V-type sodium ATPase, I subunit n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BF38_9FIRM
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L1_008_000M1_scaffold_76_27
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27499..27807)
DNA (309bp) protein (103aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BF39_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE19470.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_76_28
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28112..28603)
DNA (492bp) protein (164aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Predicted rRNA methylase (SpoU class) (EC:2.1.1.-)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=2 Tax=Dorea RepID=A6BF40_9FIRM
L1_008_000M1_scaffold_76_29
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28623..29546)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FXQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE19466.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_76_30
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29611..30552)
DNA (942bp) protein (314aa)
Thioredoxin-disulfide reductase {ECO:0000313|EMBL:EDM63631.1}; EC=1.8.1.9 {ECO:0000313|EMBL:EDM63631.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin-disulfide reductase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BF44_9FIRM
Displaying items 1-30 of 130 in total

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