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L1_008_000M1_scaffold_78

Search features with annotation key words

Displaying items 1-30 of 137 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_78_1
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3..353
DNA (351bp) protein (117aa)
nucleoside triphosphate pyrophosphohydrolase n=1 Tax=Alistipes sp. JC136 RepID=UPI000288FC80
Protein MazG {ECO:0000313|EMBL:CCZ96282.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
MazG family protein
L1_008_000M1_scaffold_78_2
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

364..888
DNA (525bp) protein (175aa)
acetyltransferase n=1 Tax=Alistipes onderdonkii RepID=UPI000368C15D
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:CDE63533.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
carbonic anhydrase/acetyltransferase
L1_008_000M1_scaffold_78_3
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

885..2237
DNA (1353bp) protein (451aa)
termination factor Rho n=1 Tax=Alistipes onderdonkii RepID=UPI00036C697B
regulator of cell autolysis
Putative regulator of cell autolysis {ECO:0000313|EMBL:CCZ75853.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L1_008_000M1_scaffold_78_4
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2234..2995
DNA (762bp) protein (254aa)
Response regulator of the LytR/AlgR family n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y1W1_9BACT
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CDD25259.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
response regulator of the LytR/AlgR family
L1_008_000M1_scaffold_78_5
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3122..3613
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:268 RepID=R6VRF4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDC96939.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
hypothetical protein
L1_008_000M1_scaffold_78_6
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3762..6692
DNA (2931bp) protein (977aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JI28_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE63535.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L1_008_000M1_scaffold_78_7
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6830..8002)
DNA (1173bp) protein (391aa)
ABC-type multidrug transport system permease component n=1 Tax=Alistipes sp. CAG:29 RepID=R6XUB5_9BACT
ABC-type multidrug transport system permease component {ECO:0000313|EMBL:CDD25255.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
multidrug ABC transporter permease
L1_008_000M1_scaffold_78_8
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8056..9234)
DNA (1179bp) protein (393aa)
ABC-type multidrug transport system permease component n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y1V5_9BACT
ABC-type multidrug transport system permease component {ECO:0000313|EMBL:CDD25254.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
multidrug ABC transporter permease
L1_008_000M1_scaffold_78_9
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9250..10236)
DNA (987bp) protein (329aa)
hemolysin secretion protein D n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F68BDC
multidrug resistance efflux pump
Multidrug resistance efflux pump {ECO:0000313|EMBL:AFL79398.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L1_008_000M1_scaffold_78_10
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10250..11689)
DNA (1440bp) protein (480aa)
Outer membrane efflux protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JII5_9BACT
Outer membrane efflux protein {ECO:0000313|EMBL:CDE63541.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
outer membrane protein
L1_008_000M1_scaffold_78_11
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11787..12878)
DNA (1092bp) protein (364aa)
pyrimidine reductase (EC:3.5.4.26)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003057F36
Riboflavin biosynthesis protein RibD C-terminal domain protein {ECO:0000313|EMBL:CDE63542.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L1_008_000M1_scaffold_78_12
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12875..14050)
DNA (1176bp) protein (392aa)
Ser/Thr phosphatase family protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JIU5_9BACT
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:CDE63543.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
phosphohydrolase
L1_008_000M1_scaffold_78_13
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14242..15609
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:53 RepID=R5W511_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ97765.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Porin subfamily
L1_008_000M1_scaffold_78_14
Leptotrichia wadei, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(15939..17306)
DNA (1368bp) protein (456aa)
Radical SAM domain protein n=1 Tax=Leptotrichia wadei F0279 RepID=U2PYS2_9FUSO
Radical SAM domain protein {ECO:0000313|EMBL:ERK48884.1}; TaxID=888055 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia wadei F0279.;"
radical SAM domain protein
L1_008_000M1_scaffold_78_15
unknown

Not on your lists

comp(17303..17479)
DNA (177bp) protein (59aa)

This feature has no annotations

L1_008_000M1_scaffold_78_16
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17744..18277)
DNA (534bp) protein (178aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9SC34_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA59960.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
L1_008_000M1_scaffold_78_17
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19146..19538
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IJQ8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK63170.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L1_008_000M1_scaffold_78_18
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19713..20792
DNA (1080bp) protein (360aa)
Bacterial capsule synthesis protein n=2 Tax=root RepID=B0MXX6_9BACT
Bacterial capsule synthesis protein {ECO:0000313|EMBL:EDS02462.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
capsule synthesis protein PGA_cap
L1_008_000M1_scaffold_78_19
Alistipes sp. 627, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20913..21407)
DNA (495bp) protein (165aa)
NADH dehydrogenase subunit E (EC:1.6.5.3)
Respiratory-chain NADH dehydrogenase 24 Kd subunit n=1 Tax=Alistipes sp. CAG:157 RepID=R5WDQ9_9BACT
NAD(P)-dependent iron-only hydrogenase diaphorase iron-sulfur protein {ECO:0000313|EMBL:KHE43082.1}; TaxID=1501391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. 627.;"
L1_008_000M1_scaffold_78_20
Alistipes sp. CAG:157, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21417..23201)
DNA (1785bp) protein (595aa)
Hydrogenase Fe-only n=1 Tax=Alistipes sp. CAG:157 RepID=R5W6I1_9BACT
Hydrogenase Fe-only {ECO:0000313|EMBL:CCZ98300.1}; TaxID=1262692 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:157.;"
NADH:ubiquinone oxidoreductase subunit
L1_008_000M1_scaffold_78_21
Alistipes sp. 627, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23219..25009)
DNA (1791bp) protein (597aa)
4Fe-4S binding domain protein n=1 Tax=Alistipes sp. CAG:157 RepID=R5WQV2_9BACT
NADH dehydrogenase {ECO:0000313|EMBL:KHE43084.1}; TaxID=1501391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. 627.;"
NADH:ubiquinone oxidoreductase subunit
L1_008_000M1_scaffold_78_22
Alistipes sp. 627, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25040..25432)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:157 RepID=R5X0Z9_9BACT
NADP oxidoreductase {ECO:0000313|EMBL:KHE43085.1}; TaxID=1501391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. 627.;"
NADP-reducing hydrogenase subunit B
L1_008_000M1_scaffold_78_23
Alistipes sp. CAG:157, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25583..26131)
DNA (549bp) protein (183aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262692 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:157.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Alistipes sp. CAG:157 RepID=R5W504_9BACT
hypothetical protein
L1_008_000M1_scaffold_78_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26128..26880)
DNA (753bp) protein (251aa)
PHP domain protein n=2 Tax=Parabacteroides merdae RepID=A7AED4_9PORP
PHP domain protein {ECO:0000313|EMBL:EDN86410.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
metal-dependent phosphoesterase
L1_008_000M1_scaffold_78_25
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26890..27222)
DNA (333bp) protein (111aa)
Uncharacterized protein n=2 Tax=Odoribacter RepID=R5UT19_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB51661.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
thiamine biosynthesis protein ThiC
L1_008_000M1_scaffold_78_26
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27227..28582)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2AUZ0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS20165.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
ferredoxin 2
L1_008_000M1_scaffold_78_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28579..29013)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZXC8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN16116.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
anti-sigma regulatory factor
L1_008_000M1_scaffold_78_28
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29060..29404)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Z9F8_9PORP
Putative manganese-dependent inorganic pyrophosphatase {ECO:0000313|EMBL:GAF03140.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
hypothetical protein
L1_008_000M1_scaffold_78_29
Alistipes sp. CAG:157, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29458..30675)
DNA (1218bp) protein (406aa)
Hydrogenase maturation GTPase HydF n=1 Tax=Alistipes sp. CAG:157 RepID=R5X104_9BACT
Hydrogenase maturation GTPase HydF {ECO:0000313|EMBL:CCZ98307.1}; TaxID=1262692 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:157.;"
GTPase
L1_008_000M1_scaffold_78_30
Alistipes sp. 627, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30686..32101)
DNA (1416bp) protein (472aa)
Iron-only hydrogenase maturation rSAM protein HydG n=1 Tax=Alistipes sp. CAG:157 RepID=R5W510_9BACT
Thiamine biosynthesis protein ThiH {ECO:0000313|EMBL:KHE43090.1}; TaxID=1501391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. 627.;"
thiH; thiamine biosynthesis protein ThiH
Displaying items 1-30 of 137 in total

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