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L1_008_000M1_scaffold_84

Search features with annotation key words

Displaying items 31-60 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_84_31
Oribacterium parvum, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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34296..34562
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Oribacterium RepID=G9WK30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL14227.1}; TaxID=796943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium parvum ACB1.;"
L1_008_000M1_scaffold_84_32
unknown

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34639..35859
DNA (1221bp) protein (407aa)

This feature has no annotations

L1_008_000M1_scaffold_84_33
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36386..38302
DNA (1917bp) protein (639aa)
DNA topoisomerase IV subunit B (EC:5.99.1.3)
DNA topoisomerase IV subunit B n=1 Tax=Clostridium sp. CAG:81 RepID=R5GGS5_9CLOT
DNA topoisomerase IV subunit B {ECO:0000313|EMBL:CCY12022.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L1_008_000M1_scaffold_84_34
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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38329..40566
DNA (2238bp) protein (746aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
DNA gyrase A subunit n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6RNT0_9FIRM
DNA gyrase subunit A
L1_008_000M1_scaffold_84_35
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40615..41880
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B7F9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD59949.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L1_008_000M1_scaffold_84_36
unknown

Not on your lists

41933..42052
DNA (120bp) protein (40aa)

This feature has no annotations

L1_008_000M1_scaffold_84_37
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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42078..42545
DNA (468bp) protein (156aa)
Ribosome maturation factor RimP n=9 Tax=Clostridium RepID=G5I7H0_9CLOT
hypothetical protein
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L1_008_000M1_scaffold_84_38
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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42615..43769
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:471 RepID=R7E9T5_9FIRM
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
transcription termination factor NusA
L1_008_000M1_scaffold_84_39
Clostridium sp. CAG:230, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43781..44071
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:230 RepID=R6DLK4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA85176.1}; TaxID=1262782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:230.;"
Predicted nucleic-acid-binding protein implicated in transcription termination
L1_008_000M1_scaffold_84_40
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44061..44366
DNA (306bp) protein (102aa)
Ribosomal protein L7Ae n=2 Tax=Clostridiales RepID=A7B8A4_RUMGN
Ribosomal protein L7Ae {ECO:0000313|EMBL:EDN75837.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L1_008_000M1_scaffold_84_41
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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44390..47386
DNA (2997bp) protein (999aa)
Translation initiation factor IF-2 n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R784_CLOSW
translation initiation factor IF-2
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L1_008_000M1_scaffold_84_42
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47451..47849
DNA (399bp) protein (133aa)
Ribosome-binding factor A n=4 Tax=Clostridiales RepID=D4MR76_9FIRM
ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L1_008_000M1_scaffold_84_43
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

47853..48839
DNA (987bp) protein (329aa)
DHH family/DHHA1 domain protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R0P4_9FIRM
DHH family/DHHA1 domain protein {ECO:0000313|EMBL:CDC42418.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Exopolyphosphatase-related proteins
L1_008_000M1_scaffold_84_44
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

48820..49758
DNA (939bp) protein (313aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
tRNA pseudouridine synthase B n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XS09_9CLOT
tRNA pseudouridine synthase B
L1_008_000M1_scaffold_84_45
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

Not on your lists

49792..50760
DNA (969bp) protein (323aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
riboflavin kinase/FMN adenylyltransferase (EC:2.7.7.2 2.7.1.26)
Riboflavin biosynthesis protein RibF n=1 Tax=Firmicutes bacterium CAG:534 RepID=R6ZM08_9FIRM
L1_008_000M1_scaffold_84_46
Stomatobaculum longum, Stomatobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50723..51994
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Stomatobaculum longum RepID=H1HWA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO15972.1}; TaxID=796942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Stomatobaculum.;" source="Stomatobaculum longum.;"
NLP/P60 protein
L1_008_000M1_scaffold_84_47
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


52123..52389
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CZS0_9CLOT
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
30S ribosomal protein S15
L1_008_000M1_scaffold_84_48
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

52669..54756
DNA (2088bp) protein (696aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BA05_9FIRM
L1_008_000M1_scaffold_84_49
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


54846..56597
DNA (1752bp) protein (584aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z9V6_9FIRM
L1_008_000M1_scaffold_84_50
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

56842..60111
DNA (3270bp) protein (1090aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9WXA9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY92147.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
SNF2-like protein
L1_008_000M1_scaffold_84_51
unknown

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comp(60067..61473)
DNA (1407bp) protein (469aa)

This feature has no annotations

L1_008_000M1_scaffold_84_52
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

61559..62401
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EWP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX85100.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
Predicted metal-dependent phosphoesterases (PHP family)
L1_008_000M1_scaffold_84_53
unknown

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62464..63180
DNA (717bp) protein (239aa)

This feature has no annotations

L1_008_000M1_scaffold_84_54
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

63213..64772
DNA (1560bp) protein (520aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DV38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82789.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
glycoside hydrolase family 28
L1_008_000M1_scaffold_84_55
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

65415..66119
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JBE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS31428.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
Protease subunit of ATP-dependent Clp proteases
L1_008_000M1_scaffold_84_56
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

66116..69274
DNA (3159bp) protein (1053aa)
FtsK/SpoIIIE family protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LCE7_9FIRM
FtsK/SpoIIIE family protein {ECO:0000313|EMBL:EET61611.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
DNA segregation ATPase FtsK/SpoIIIE and related proteins
L1_008_000M1_scaffold_84_57
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

69300..70970
DNA (1671bp) protein (557aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
Formate-tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XFU6_9FIRM
L1_008_000M1_scaffold_84_58
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

70996..72498
DNA (1503bp) protein (501aa)
UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00085409}; EC=6.3.2.- {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00276926};; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
UDP-N-acetylmuramyl-tripeptide synthetase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D991_9CLOT
UDP-N-acetylmuramyl-tripeptide synthetase
L1_008_000M1_scaffold_84_59
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

72495..73868
DNA (1374bp) protein (458aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=2 Tax=Clostridium RepID=R5T4Z0_9CLOT
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase
L1_008_000M1_scaffold_84_60
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

73879..76089
DNA (2211bp) protein (737aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
Primosomal protein N' n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R256_CLOSW
primosomal protein N'
Displaying items 31-60 of 100 in total

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