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L1_008_000M1_scaffold_84

Search features with annotation key words

Displaying items 61-90 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_84_61
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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76124..76657
DNA (534bp) protein (178aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LGY3_9FIRM
L1_008_000M1_scaffold_84_62
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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76700..77638
DNA (939bp) protein (313aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D9B3_9CLOT
L1_008_000M1_scaffold_84_63
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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77675..78379
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9J5B9_9FIRM
putative Zn-dependent protease
Uncharacterized protein {ECO:0000313|EMBL:EOS26382.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
L1_008_000M1_scaffold_84_64
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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78372..79712
DNA (1341bp) protein (447aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3ABH4_9FIRM
sun protein
L1_008_000M1_scaffold_84_65
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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79797..80870
DNA (1074bp) protein (358aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
23S rRNA m(2)A-2503 methyltransferase (EC:2.1.1.-)
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Clostridium sp. CAG:299 RepID=R7ACC9_9CLOT
L1_008_000M1_scaffold_84_66
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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80885..81610
DNA (726bp) protein (242aa)
Serine/threonine protein phosphatase (EC:3.1.3.16)
Serine/threonine protein phosphatase {ECO:0000313|EMBL:CBL42369.1}; EC=3.1.3.16 {ECO:0000313|EMBL:CBL42369.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Serine/threonine protein phosphatase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GX27_9FIRM
L1_008_000M1_scaffold_84_67
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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81636..84215
DNA (2580bp) protein (860aa)
Serine/threonine protein kinase (EC:2.7.11.1)
Serine/threonine protein kinase n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9X798_9CLOT
Serine/threonine protein kinase {ECO:0000313|EMBL:ENZ51309.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
L1_008_000M1_scaffold_84_68
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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84239..85126
DNA (888bp) protein (296aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
ribosome small subunit-dependent GTPase A (EC:3.6.1.-)
Putative ribosome biogenesis GTPase RsgA n=2 Tax=Dorea RepID=A6BJM9_9FIRM
L1_008_000M1_scaffold_84_69
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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85145..85816
DNA (672bp) protein (224aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Blautia sp. CAG:52 RepID=R6GH36_9FIRM
L1_008_000M1_scaffold_84_70
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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85847..86509
DNA (663bp) protein (221aa)
thiamine diphosphokinase (EC:2.7.6.2)
Thiamine pyrophosphokinase n=2 Tax=Clostridiales RepID=R5U7W8_9FIRM
Thiamine pyrophosphokinase {ECO:0000313|EMBL:CCZ65097.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
L1_008_000M1_scaffold_84_71
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

86506..87528
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NZ98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC13769.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
hypothetical protein
L1_008_000M1_scaffold_84_72
Gallibacterium anatis, Gallibacterium, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(87553..88587)
DNA (1035bp) protein (345aa)
Acyltransferase family n=2 Tax=Gallibacterium anatis RepID=F4HEZ6_GALAU
acyltransferase family
Polyhydroxyalkanoate depolymerase {ECO:0000313|EMBL:ERF78858.1}; TaxID=1195244 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Gallibacterium.;" source="Gallibacterium anatis 12656/12.;"
L1_008_000M1_scaffold_84_73
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

88830..89888
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EFY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA98830.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
WcaA; cell wall biogenesis glycosyltransferase
L1_008_000M1_scaffold_84_74
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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89901..91013
DNA (1113bp) protein (371aa)
Glycosyltransferase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E0X5_9FIRM
Glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:CBK91496.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_008_000M1_scaffold_84_75
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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91015..92478
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MXV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY90166.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Lipid A core-O-antigen ligase and related enzymes
L1_008_000M1_scaffold_84_76
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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92481..93479
DNA (999bp) protein (333aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AP77_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG89472.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
glycosyltransferase family 2 candidate b-glycosyltransferase
L1_008_000M1_scaffold_84_77
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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93502..95541
DNA (2040bp) protein (680aa)
GDSL-like protein n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NVF2_9FIRM
GDSL-like protein {ECO:0000313|EMBL:EEF92815.1}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
N-acetylmuramoyl-L-alanine amidase
L1_008_000M1_scaffold_84_78
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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95594..97474
DNA (1881bp) protein (627aa)
ErfK/YbiS/YcfS/YnhG n=3 Tax=root RepID=R5MRZ2_9FIRM
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:CCY92894.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
polysaccharide deacetylase
L1_008_000M1_scaffold_84_79
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

97553..99142
DNA (1590bp) protein (530aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KQB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS48664.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
membrane protein
L1_008_000M1_scaffold_84_80
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

99129..100604
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MM47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS71736.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
L1_008_000M1_scaffold_84_81
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

100696..100923
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KQN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS48663.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
D-alanine--poly(phosphoribitol) ligase subunit 2
L1_008_000M1_scaffold_84_82
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

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100927..103053
DNA (2127bp) protein (709aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KYS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS48662.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
L1_008_000M1_scaffold_84_83
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

comp(103186..106617)
DNA (3432bp) protein (1144aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BMV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD66847.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
alpha-L-rhamnosidase
L1_008_000M1_scaffold_84_84
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

106790..108274
DNA (1485bp) protein (495aa)
Dipeptidase {ECO:0000313|EMBL:EEG92931.1}; EC=3.4.-.- {ECO:0000313|EMBL:EEG92931.1};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
dipeptidase A. Cysteine peptidase. MEROPS family C69 (EC:3.4.-.-)
Dipeptidase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FWX2_9FIRM
L1_008_000M1_scaffold_84_85
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

108337..108948
DNA (612bp) protein (204aa)
Pyrrolidone-carboxylate peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; EC=3.4.19.3 {ECO:0000256|HAMAP-Rule:MF_00417};; 5-oxoprolyl-peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; Pyroglutamyl-peptidase I {ECO:0000256|HAMAP-Rule:MF_00417}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
pcp; pyroglutamyl-peptidase I (EC:3.4.19.3)
Pyrrolidone-carboxylate peptidase n=1 Tax=Blautia sp. CAG:37 RepID=R7JSC2_9FIRM
L1_008_000M1_scaffold_84_86
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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109120..110457
DNA (1338bp) protein (446aa)
MatE domain-containing protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A5S9_9CLOT
MatE domain-containing protein {ECO:0000313|EMBL:CCX37029.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
putative efflux protein, MATE family
L1_008_000M1_scaffold_84_87
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(110647..111615)
DNA (969bp) protein (323aa)
Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=B0NI73_CLOSV
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDS05821.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
AraC family transcriptional regulator
L1_008_000M1_scaffold_84_88
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

111796..112923
DNA (1128bp) protein (376aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CH70_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG50889.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
Phosphotransferase enzyme family.
L1_008_000M1_scaffold_84_89
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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112992..114779
DNA (1788bp) protein (596aa)
HAMP domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CTF6_9CLOT
HAMP domain protein {ECO:0000313|EMBL:ERI72542.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
signal transduction histidine kinase LytS
L1_008_000M1_scaffold_84_90
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

114755..116284
DNA (1530bp) protein (510aa)
Response regulator receiver domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BL61_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:ERI72543.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
AraC family transcriptional regulator
Displaying items 61-90 of 100 in total

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