ggKbase home page

L1_008_000M1_scaffold_84_61

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: 76124..76657

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 162.0
  • Bit_score: 226
  • Evalue 2.70e-56
peptide deformylase (EC:3.5.1.88) similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 162.0
  • Bit_score: 225
  • Evalue 9.30e-57
Peptide deformylase n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LGY3_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 67.7
  • Coverage: 161.0
  • Bit_score: 226
  • Evalue 1.90e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. CAG:299 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 534
ATGGGAATCAGAACAGTTAGAACAGAGGGCGATGAGTGCCTTCGCAAGGTATGCAAGCCAGTAAAGTCTGTAAGTTTAAGAACAAGAATTTTAATCGAGGATATGTTTGATACAATGTATGAGAGCGGCGGTGTAGGCTTGGCAGCTCCGCAGATCGGTGTATTAAAGCGCATTGTTGTTATGGATACCGATGACAATCAGCATGTATTGATCAATCCACAAATTTTAGAGGTTAGCGGTGAGCAGACAGGCTATGAGGGATGTCTTAGCATTCCGGGAAAGAGCGGTATTGTAACAAGACCTGATTATGTAAAGGTAAAGGCATTAAATGAGCACGGAGAGGAATACGTCTTAGAGGGCGAAGGTCTTCTGGCAAGATGCATTTGTCATGAGTGCGATCATCTTGATGGTATTTTGTACAGTGATAAGGCAGAGGGCGGTCTGATCAATAATGAAGATTTGCCGGAGGATGAGGAAGAAGAACTGTACGAGGATGCTTATGAGGAATTTACTGAAGAAGAAATTCACAAATAA
PROTEIN sequence
Length: 178
MGIRTVRTEGDECLRKVCKPVKSVSLRTRILIEDMFDTMYESGGVGLAAPQIGVLKRIVVMDTDDNQHVLINPQILEVSGEQTGYEGCLSIPGKSGIVTRPDYVKVKALNEHGEEYVLEGEGLLARCICHECDHLDGILYSDKAEGGLINNEDLPEDEEEELYEDAYEEFTEEEIHK*