ggKbase home page

L1_008_000M1_scaffold_87

Search features with annotation key words

Displaying items 1-30 of 184 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_87_1
Brevibacillus laterosporus, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(107..832)
DNA (726bp) protein (242aa)
Putative antirepressor n=1 Tax=Salimicrobium sp. MJ3 RepID=K2FH35_9BACI
Uncharacterized protein {ECO:0000313|EMBL:AKF92712.1}; TaxID=1465 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus laterosporus (Bacillus laterosporus).;"
phage regulatory protein, Rha family
L1_008_000M1_scaffold_87_2
unknown

Not on your lists

comp(813..1097)
DNA (285bp) protein (95aa)

This feature has no annotations

L1_008_000M1_scaffold_87_3
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1191..1352)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6ST40_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC49787.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
L1_008_000M1_scaffold_87_4
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1470..2000
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BHP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO19996.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
Predicted transcriptional regulators
L1_008_000M1_scaffold_87_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2089..2481)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum BKT015925 RepID=F4AB28_CLOBO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS77118.1}; TaxID=445337 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C str. Eklund.;"
L1_008_000M1_scaffold_87_6
unknown

Not on your lists

comp(2469..2636)
DNA (168bp) protein (56aa)

This feature has no annotations

L1_008_000M1_scaffold_87_7
unknown

Not on your lists

comp(2869..3054)
DNA (186bp) protein (62aa)

This feature has no annotations

L1_008_000M1_scaffold_87_8
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3069..3362)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H2S3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE32522.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
hypothetical protein
L1_008_000M1_scaffold_87_9
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3375..3854)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BA49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG89691.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Protein of unknown function (DUF2829).
L1_008_000M1_scaffold_87_10
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3859..4113)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NRB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF94288.1}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
Hypothetical protein
L1_008_000M1_scaffold_87_11
unknown

Not on your lists

comp(4132..4278)
DNA (147bp) protein (49aa)

This feature has no annotations

L1_008_000M1_scaffold_87_12
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4333..4491)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQ62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23132.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_87_13
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4493..6208)
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Clostridium innocuum 2959 RepID=N9WVZ2_CLOIN
Uncharacterized protein {ECO:0000313|EMBL:ENY87768.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L1_008_000M1_scaffold_87_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6198..7667)
DNA (1470bp) protein (490aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00036E0D7F
Uncharacterized protein {ECO:0000313|EMBL:EEP54524.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
bacteriophage portal protein, SPP1 Gp6-like protein
L1_008_000M1_scaffold_87_15
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7667..9037)
DNA (1371bp) protein (457aa)
Phage terminase, large subunit, PBSX family n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RC01_9FIRM
Phage terminase, large subunit, PBSX family {ECO:0000313|EMBL:EDP11309.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
phage terminase, large subunit, PBSX family
L1_008_000M1_scaffold_87_16
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

comp(9021..9812)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RHG4_9FIRM
Terminase small subunit {ECO:0000313|EMBL:CDD72776.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
xtmA; PBSX defective prophage terminase (small subunit)
L1_008_000M1_scaffold_87_17
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10696..11193)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G970_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW05360.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
L1_008_000M1_scaffold_87_18
unknown

Not on your lists

comp(11318..11509)
DNA (192bp) protein (64aa)

This feature has no annotations

L1_008_000M1_scaffold_87_19
unknown

Not on your lists

comp(11493..11846)
DNA (354bp) protein (118aa)

This feature has no annotations

L1_008_000M1_scaffold_87_20
Bacillus phage SIOphi, Caudovirales, Viruses

Not on your lists

comp(11857..12246)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Bacillus phage SIOphi RepID=R4JK79_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:AGK86914.1}; TaxID=1285382 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Bacillus phage SIOphi.;"
Phage protein
L1_008_000M1_scaffold_87_21
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(12247..12429)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RH68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32332.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L1_008_000M1_scaffold_87_22
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12422..12607)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Staphylococcus epidermidis NIHLM021 RepID=J1AI62_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EUZ69596.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
hypothetical protein
L1_008_000M1_scaffold_87_23
unknown

Not on your lists

comp(12574..13026)
DNA (453bp) protein (151aa)

This feature has no annotations

L1_008_000M1_scaffold_87_24
unknown

Not on your lists

comp(13008..13190)
DNA (183bp) protein (61aa)

This feature has no annotations

L1_008_000M1_scaffold_87_25
unknown

Not on your lists

comp(13183..13461)
DNA (279bp) protein (93aa)

This feature has no annotations

L1_008_000M1_scaffold_87_26
unknown

Not on your lists

comp(13454..13822)
DNA (369bp) protein (123aa)

This feature has no annotations

L1_008_000M1_scaffold_87_27
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13812..14273)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NR87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF94257.1}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
L1_008_000M1_scaffold_87_28
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14273..14872)
DNA (600bp) protein (200aa)
MutT/NUDIX family protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZF18_EUBR3
MutT/NUDIX family protein
MutT/NUDIX family protein {ECO:0000313|EMBL:ACR76139.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_008_000M1_scaffold_87_29
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14897..15163)
DNA (267bp) protein (89aa)
Conserved domain protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N9Z9_9FIRM
Conserved domain protein {ECO:0000313|EMBL:CDF09411.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
L1_008_000M1_scaffold_87_30
Clostridiales bacterium S5-A14a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15166..15540)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Allofustis seminis RepID=UPI000382B906
Uncharacterized protein {ECO:0000313|EMBL:KGF09693.1}; TaxID=1230734 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Clostridiales bacterium S5-A14a.;"
Displaying items 1-30 of 184 in total

View Taxonomy