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L1_008_000M1_scaffold_89

Search features with annotation key words

Displaying items 1-30 of 104 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_89_1
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15..659)
DNA (645bp) protein (215aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A1A260_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY19068.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L1_008_000M1_scaffold_89_2
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

869..1957
DNA (1089bp) protein (363aa)
Probably bifunctional short chain isoprenyl diphosphate synthase n=3 Tax=Bifidobacterium RepID=A1A261_BIFAA
bifunctional short chain isoprenyl diphosphate synthase
Bifunctional short chain isoprenyl diphosphate synthase {ECO:0000313|EMBL:AII76480.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_89_3
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2080..4251
DNA (2172bp) protein (724aa)
Kinase domain protein n=3 Tax=Bifidobacterium RepID=A7A8B4_BIFAD
Serine-threonine protein kinase pknA2 {ECO:0000313|EMBL:AII76481.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
serine-threonine protein kinase pknA2
L1_008_000M1_scaffold_89_4
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4350..5078)
DNA (729bp) protein (243aa)
Acyltransferase n=2 Tax=Bifidobacterium RepID=A7A8B5_BIFAD
acyltransferase
Acyltransferase {ECO:0000313|EMBL:CCY19071.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L1_008_000M1_scaffold_89_5
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5201..5695
DNA (495bp) protein (165aa)
Uncharacterized protein n=2 Tax=Bifidobacterium adolescentis RepID=A1A264_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIM00882.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_89_6
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5797..5982)
DNA (186bp) protein (62aa)
Transposase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MWC0_BIFL1
integrase
Integrase {ECO:0000313|EMBL:AIZ14467.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L1_008_000M1_scaffold_89_7
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5979..6656)
DNA (678bp) protein (226aa)
IS150 putative transposase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A266_BIFAA
t150; IS150 putative transposase
IS150 putative transposase {ECO:0000313|EMBL:BAF39799.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L1_008_000M1_scaffold_89_8
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6768..7823)
DNA (1056bp) protein (352aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
Anthranilate phosphoribosyltransferase 1 n=2 Tax=Bifidobacterium RepID=A1A267_BIFAA
trpD; anthranilate phosphoribosyltransferase
L1_008_000M1_scaffold_89_9
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8014..11031)
DNA (3018bp) protein (1006aa)
Protein translocase subunit SecA n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A8C1_BIFAD
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
preprotein translocase SecA subunit
L1_008_000M1_scaffold_89_10
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11069..11731)
DNA (663bp) protein (221aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A1A269_BIFAA
hypothetical protein
Ribosome-associated factor Y {ECO:0000313|EMBL:KFI97731.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L1_008_000M1_scaffold_89_11
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12353..13048)
DNA (696bp) protein (232aa)
RecX-like protein n=3 Tax=Bifidobacterium RepID=A1A271_BIFAA
RecX-like protein
RecX family transcriptional regulator {ECO:0000313|EMBL:KIM01506.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_89_12
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(13052..14194)
DNA (1143bp) protein (381aa)
Protein RecA n=2 Tax=Bifidobacterium adolescentis RepID=A1A272_BIFAA
protein recA (Recombinase A)
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L1_008_000M1_scaffold_89_13
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14773..15282)
DNA (510bp) protein (170aa)
DNA-binding helix-turn-helix protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A8C7_BIFAD
putative DNA binding protein
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDN81992.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L1_008_000M1_scaffold_89_14
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15345..15911)
DNA (567bp) protein (189aa)
Competence/damage-inducible domain protein CinA n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A8C8_BIFAD
CinA-like protein
CinA-like protein {ECO:0000313|EMBL:AJE06141.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_89_15
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15918..16592)
DNA (675bp) protein (225aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A8C9_BIFAD
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:AII76495.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_89_16
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16652..19375)
DNA (2724bp) protein (908aa)
DNA translocase ftsK n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H2D9_9BIFI
Cell division protein FtsK {ECO:0000313|EMBL:KIM01512.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
DNA translocase ftsK
L1_008_000M1_scaffold_89_17
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19552..20562)
DNA (1011bp) protein (337aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
tRNA dimethylallyltransferase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=MIAA_BIFAA
tRNA delta(2)-isopentenylpyrophosphate transferase
L1_008_000M1_scaffold_89_18
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20546..22000)
DNA (1455bp) protein (485aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A8D6_BIFAD
hypothetical protein
L1_008_000M1_scaffold_89_19
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22191..22874
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A281_BIFAA
GTP-pyrophosphokinase
Uncharacterized protein {ECO:0000313|EMBL:BAF39814.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L1_008_000M1_scaffold_89_20
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22946..23920)
DNA (975bp) protein (325aa)
Putative membrane protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GTN0_9BIFI
Transporter, drug/metabolite exporter family
Membrane protein {ECO:0000313|EMBL:KIM01515.1}; Putative integral membrane protein with duf6 {ECO:0000313|EMBL:AJE06147.1}; Transporter, drug/metabolite exporter family {ECO:0000313|EMBL:AII76500.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_89_21
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24023..24904)
DNA (882bp) protein (294aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A1A283_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY19111.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L1_008_000M1_scaffold_89_22
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25021..25791)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H2E8_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE06149.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_89_23
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25945..27327
DNA (1383bp) protein (461aa)
Atypical histidine kinase sensor of two-component system n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GPE0_9BIFI
Atypical histidine kinase sensor of two-component system {ECO:0000313|EMBL:CCY19113.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
histidine kinase sensor of two-component system
L1_008_000M1_scaffold_89_24
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27324..28016
DNA (693bp) protein (231aa)
Response regulator receiver domain protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A8E2_BIFAD
Response regulator receiver domain protein {ECO:0000313|EMBL:EDN82007.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
response regulator of two-component system
L1_008_000M1_scaffold_89_25
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28134..30248
DNA (2115bp) protein (705aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A8E3_BIFAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDN82008.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L1_008_000M1_scaffold_89_26
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30312..31016)
DNA (705bp) protein (235aa)
Response regulator of two-component system n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H2V5_9BIFI
response regulator of two-component system
Response regulator of two-component system {ECO:0000313|EMBL:CCY19116.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L1_008_000M1_scaffold_89_27
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31016..32230)
DNA (1215bp) protein (405aa)
Histidine kinase sensor of two-component system n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A289_BIFAA
histidine kinase sensor of two-component system
Histidine kinase sensor of two-component system {ECO:0000313|EMBL:AJE06154.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_89_28
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32297..33433
DNA (1137bp) protein (379aa)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium adolescentis RepID=A7A8E7_BIFAD
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN82011.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
putative ATP binding protein of ABC transporter
L1_008_000M1_scaffold_89_29
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33478..34728
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A291_BIFAA
ABC-type multidrug transport system permease component
ABC-type multidrug transport system permease component {ECO:0000313|EMBL:AII76509.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_89_30
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34715..36004
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A292_BIFAA
ABC transporter {ECO:0000313|EMBL:KFI97710.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
Displaying items 1-30 of 104 in total

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