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L1_008_000M1_scaffold_94

Search features with annotation key words

Displaying items 1-30 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_94_1
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..141
DNA (141bp) protein (47aa)
Integrase core domain protein n=2 Tax=Clostridium sp. CAG:169 RepID=R6BQ49_9CLOT
Integrase core domain protein {ECO:0000313|EMBL:CDA62191.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
putative transposase
L1_008_000M1_scaffold_94_2
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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420..1871
DNA (1452bp) protein (484aa)
Predicted ATPase (AAA+ superfamily) n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DR66_9FIRM
Predicted ATPase (AAA+ superfamily) {ECO:0000313|EMBL:CCX82663.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Predicted ATPase (AAA+ superfamily)
L1_008_000M1_scaffold_94_3
unknown

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2490..2918
DNA (429bp) protein (143aa)

This feature has no annotations

L1_008_000M1_scaffold_94_4
unknown

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2990..4225
DNA (1236bp) protein (412aa)

This feature has no annotations

L1_008_000M1_scaffold_94_5
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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4234..5019
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YHT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD30969.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
L1_008_000M1_scaffold_94_6
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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5012..5863
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y4W4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD30968.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
L1_008_000M1_scaffold_94_7
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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5875..6507
DNA (633bp) protein (211aa)
ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6ZKI2_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD30967.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
ABC transporter ATP-binding protein
L1_008_000M1_scaffold_94_8
unknown

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comp(7138..7566)
DNA (429bp) protein (143aa)

This feature has no annotations

L1_008_000M1_scaffold_94_9
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7583..7918)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MM49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF00792.1}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
Predicted transcriptional regulators
L1_008_000M1_scaffold_94_10
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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8091..8354
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YP37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD30371.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
L1_008_000M1_scaffold_94_11
unknown

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8576..8683
DNA (108bp) protein (36aa)

This feature has no annotations

L1_008_000M1_scaffold_94_12
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9729..10991
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5ABM6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX38457.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
hypothetical protein
L1_008_000M1_scaffold_94_13
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11154..14921
DNA (3768bp) protein (1256aa)
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5ADT5_9CLOT
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:CCX37516.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
L1_008_000M1_scaffold_94_14
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

15005..16198
DNA (1194bp) protein (398aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YA66_9FIRM
L1_008_000M1_scaffold_94_15
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16276..16704
DNA (429bp) protein (143aa)
Cellobiose 2-epimerase {ECO:0000256|HAMAP-Rule:MF_00929}; Short=CE {ECO:0000256|HAMAP-Rule:MF_00929};; EC=5.1.3.11 {ECO:0000256|HAMAP-Rule:MF_00929};; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
Cellobiose 2-epimerase n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MJV7_9FIRM
hypothetical protein
L1_008_000M1_scaffold_94_16
Campylobacter coli, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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16919..17347
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Campylobacter coli RepID=J7FBG0_CAMCO
Uncharacterized protein {ECO:0000313|EMBL:AFJ97262.1}; TaxID=195 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter coli.;"
hypothetical protein
L1_008_000M1_scaffold_94_17
unknown

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comp(17624..18100)
DNA (477bp) protein (159aa)

This feature has no annotations

L1_008_000M1_scaffold_94_18
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18301..18930)
DNA (630bp) protein (210aa)
Uncharacterized protein n=2 Tax=Dorea sp. 5-2 RepID=R9NE96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS81266.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Acetyltransferase (GNAT) family.
L1_008_000M1_scaffold_94_19
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18946..21693)
DNA (2748bp) protein (916aa)
Protein translocase subunit SecA n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A768_9CLOT
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
secA; Protein translocase subunit SecA
L1_008_000M1_scaffold_94_20
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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22100..23545
DNA (1446bp) protein (482aa)
Putative permease n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DXS2_9FIRM
Putative permease {ECO:0000313|EMBL:CDA92395.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
Permeases
L1_008_000M1_scaffold_94_21
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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23689..24864
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BH49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM63037.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L1_008_000M1_scaffold_94_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24915..27992)
DNA (3078bp) protein (1026aa)
Alpha-mannosidase (EC:3.2.1.24)
Alpha-mannosidase {ECO:0000313|EMBL:CBL14320.1}; EC=3.2.1.24 {ECO:0000313|EMBL:CBL14320.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Alpha-mannosidase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L3Y0_9FIRM
L1_008_000M1_scaffold_94_23
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

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28337..29137
DNA (801bp) protein (267aa)
Bacterial extracellular solute-binding protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6WDL3_9FIRM
Bacterial extracellular solute-binding protein {ECO:0000313|EMBL:CDC92292.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L1_008_000M1_scaffold_94_24
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29134..31713
DNA (2580bp) protein (860aa)
Signal transduction histidine kinase n=1 Tax=Roseburia sp. CAG:380 RepID=R6VR98_9FIRM
Signal transduction histidine kinase {ECO:0000313|EMBL:CDC96874.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Signal transduction histidine kinase
L1_008_000M1_scaffold_94_25
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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32037..33731
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DCP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74622.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
L1_008_000M1_scaffold_94_26
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33813..34865
DNA (1053bp) protein (351aa)
Twitching motility protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D956_9CLOT
Pilus retraction protein PilT {ECO:0000313|EMBL:ETP71470.1}; TaxID=1165092 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium JC7.;"
pilus retraction protein PilT
L1_008_000M1_scaffold_94_27
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

34893..36101
DNA (1209bp) protein (403aa)
Type II secretion system protein F n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D386_9FIRM
Type II secretion system protein F {ECO:0000313|EMBL:CCX74623.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
HofF; general secretory pathway protein F
L1_008_000M1_scaffold_94_28
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

36227..36673
DNA (447bp) protein (149aa)
Prepilin-type N-terminal cleavage/methylation domain n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6E852_9ACTN
Prepilin-type N-terminal cleavage/methylation domain {ECO:0000313|EMBL:CBL03899.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
hypothetical protein
L1_008_000M1_scaffold_94_29
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

36804..37616
DNA (813bp) protein (271aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
Type II secretory pathway, prepilin signal peptidase PulO and related peptidases (EC:2.1.1.- 3.4.23.43)
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D317_9FIRM
L1_008_000M1_scaffold_94_30
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

37682..38683
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DFF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74626.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
FtsA; putative ATPase of the HSP70 class involved in cell division
Displaying items 1-30 of 98 in total

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