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L1_008_000M1_scaffold_107

Search features with annotation key words

Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_107_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(118..534)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FKD3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83492.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Protein of unknown function (DUF2992).
L1_008_000M1_scaffold_107_2
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(725..1135)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZBJ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD43530.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L1_008_000M1_scaffold_107_3
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1140..2204)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5P0C5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ09498.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
L1_008_000M1_scaffold_107_4
[Eubacterium] infirmum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2211..2426)
DNA (216bp) protein (72aa)
Putative uncharacterized protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PMP2_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EHO82593.1}; TaxID=883109 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium infirmum F0142.;"
toxin-antitoxin system, antitoxin component, Xre family
L1_008_000M1_scaffold_107_5
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3025..3318)
DNA (294bp) protein (98aa)
Transposase n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I838_9CLOT
Transposase {ECO:0000313|EMBL:ETA81414.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
transposase IS3/IS911 family protein
L1_008_000M1_scaffold_107_6
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3444..6749)
DNA (3306bp) protein (1102aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K3Q3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN48200.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
putative helicase
L1_008_000M1_scaffold_107_7
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6764..8620)
DNA (1857bp) protein (619aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6S184_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC49071.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Superfamily I DNA and RNA helicases
L1_008_000M1_scaffold_107_8
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(8897..10114)
DNA (1218bp) protein (406aa)
Type I restriction modification DNA specificity domain protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R590_9FIRM
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:CCZ33899.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
restriction modification system DNA specificity protein
L1_008_000M1_scaffold_107_9
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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comp(10114..11718)
DNA (1605bp) protein (535aa)
Type I restriction-modification system, M subunit n=1 Tax=Eggerthella sp. HGA1 RepID=F0HQZ1_9ACTN
Type I restriction-modification system, M subunit {ECO:0000313|EMBL:KGI74207.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
hypothetical protein
L1_008_000M1_scaffold_107_10
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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comp(11721..14633)
DNA (2913bp) protein (971aa)
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:EGC88324.1}; EC=3.1.21.3 {ECO:0000313|EMBL:EGC88324.1};; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Eggerthella sp. HGA1 RepID=F0HQZ2_9ACTN
hypothetical protein
L1_008_000M1_scaffold_107_11
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14933..15520)
DNA (588bp) protein (196aa)
Predicted metal-dependent hydrolase n=1 Tax=Clostridium sp. CAG:632 RepID=R5JTD7_9CLOT
Predicted metal-dependent hydrolase {ECO:0000313|EMBL:CCY57828.1}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
Predicted metal-dependent hydrolase
L1_008_000M1_scaffold_107_12
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15635..16288)
DNA (654bp) protein (218aa)
von Willebrand factor type A n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZJ2_CLOSW
von Willebrand factor type A
von Willebrand factor type A {ECO:0000313|EMBL:ADL06218.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L1_008_000M1_scaffold_107_13
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16455..17456)
DNA (1002bp) protein (334aa)
Appr-1-p processing domain protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZJ3_CLOSW
Appr-1-p processing protein
Appr-1-p processing domain protein {ECO:0000313|EMBL:ADL06219.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L1_008_000M1_scaffold_107_14
Mycoplasma sp. CAG:472, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(17472..20267)
DNA (2796bp) protein (932aa)
hypothetical protein n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B5BC93
DEAD/DEAH box helicase {ECO:0000313|EMBL:CDE38664.1}; TaxID=1262904 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma; environmental samples.;" source="Mycoplasma sp. CAG:472.;"
helicase
L1_008_000M1_scaffold_107_15
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20295..21164)
DNA (870bp) protein (290aa)
PHP domain protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EKE4_9FIRM
PHP domain protein {ECO:0000313|EMBL:CDE02728.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
PHP domain-containing protein
L1_008_000M1_scaffold_107_16
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

Not on your lists

comp(21292..21669)
DNA (378bp) protein (126aa)
hisIE; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase HisIE (EC:3.5.4.19)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:534 RepID=R6ZS27_9FIRM
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019, ECO:0000256|SAAS:SAAS00015509}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
L1_008_000M1_scaffold_107_17
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21688..22278)
DNA (591bp) protein (197aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599};; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUM3_9FIRM
imidazoleglycerol-phosphate dehydratase
L1_008_000M1_scaffold_107_18
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22304..23605)
DNA (1302bp) protein (434aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T481_9CLOT
L1_008_000M1_scaffold_107_19
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23629..24276)
DNA (648bp) protein (216aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302};; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
hisG; ATP phosphoribosyltransferase catalytic subunit (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NKX6_9FIRM
L1_008_000M1_scaffold_107_20
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24294..25562)
DNA (1269bp) protein (423aa)
histidyl-tRNA synthetase 2 (EC:6.1.1.21)
ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IG71_9CLOT
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
L1_008_000M1_scaffold_107_21
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25665..26222)
DNA (558bp) protein (186aa)
Holliday junction resolvase RecU {ECO:0000256|HAMAP-Rule:MF_00130, ECO:0000256|SAAS:SAAS00056687}; EC=3.1.22.- {ECO:0000256|HAMAP-Rule:MF_00130, ECO:0000256|SAAS:SAAS00056689};; Recombination protein U homolog {ECO:0000256|HAMAP-Rule:MF_00130}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
Holliday junction resolvase RecU n=1 Tax=Eubacterium sp. CAG:86 RepID=R5E2G8_9FIRM
Recombination protein U
L1_008_000M1_scaffold_107_22
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26228..27262)
DNA (1035bp) protein (345aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
pseudouridine synthase, RluA family (EC:5.4.99.12)
Uncharacterized protein n=2 Tax=Dorea RepID=R6S156_9FIRM
L1_008_000M1_scaffold_107_23
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27259..27828)
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R106_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL04553.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L1_008_000M1_scaffold_107_24
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27848..28510)
DNA (663bp) protein (221aa)
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily subfamily IA variant 1 with third motif having Dx(3-4)D or Dx(3-4)E n=1 Tax=Clostridium sp. CAG:58 RepID=R6RQT4_9CLOT
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily subfamily IA variant 1 with third motif having Dx(3-4)D or Dx(3-4)E {ECO:0000313|EMBL:CDC50005.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
HAD-superfamily hydrolase
L1_008_000M1_scaffold_107_25
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28492..29190)
DNA (699bp) protein (233aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
Pseudouridine synthase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9WYT8_9CLOT
pseudouridine synthase
L1_008_000M1_scaffold_107_26
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29190..30557)
DNA (1368bp) protein (456aa)
Fmu (Sun) domain protein n=1 Tax=Clostridium sp. CAG:411 RepID=R7HZL6_9CLOT
Fmu (Sun) domain protein {ECO:0000313|EMBL:CDE44780.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
hypothetical protein
L1_008_000M1_scaffold_107_27
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

30621..31514
DNA (894bp) protein (298aa)
Putative sporulation integral membrane protein YlbJ n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6V5N7_9FIRM
Putative sporulation integral membrane protein YlbJ {ECO:0000313|EMBL:CDC92350.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
hypothetical protein
L1_008_000M1_scaffold_107_28
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31583..32182)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HC78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36583.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L1_008_000M1_scaffold_107_29
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32214..32726)
DNA (513bp) protein (171aa)
pantetheine-phosphate adenylyltransferase, bacterial (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Phosphopantetheine adenylyltransferase n=4 Tax=Clostridiales RepID=D6DJQ3_CLOSC
L1_008_000M1_scaffold_107_30
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32733..33299)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:252 RepID=R6K1D6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB68833.1}; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
RNA methyltransferase, RsmD family
Displaying items 1-30 of 100 in total

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