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L1_008_000M1_scaffold_112

Search features with annotation key words

Displaying items 1-30 of 115 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_112_1
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..153
DNA (153bp) protein (51aa)
Predicted transcriptional regulators n=5 Tax=Clostridiales RepID=D4LZQ5_9FIRM
Predicted transcriptional regulators
Putative arsenical resistance operon repressor {ECO:0000313|EMBL:ERK51589.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L1_008_000M1_scaffold_112_2
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(342..1376)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AJF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46827.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
antigen-like protein
L1_008_000M1_scaffold_112_3
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1712..2002)
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PWQ2_CLOSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH20867.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB; 10654).;"
L1_008_000M1_scaffold_112_4
unknown

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comp(2454..2663)
DNA (210bp) protein (70aa)

This feature has no annotations

L1_008_000M1_scaffold_112_5
unknown

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comp(3080..3199)
DNA (120bp) protein (40aa)

This feature has no annotations

L1_008_000M1_scaffold_112_6
unknown

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comp(3357..3569)
DNA (213bp) protein (71aa)

This feature has no annotations

L1_008_000M1_scaffold_112_7
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4077..5324
DNA (1248bp) protein (416aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|RuleBase:RU004370, ECO:0000256|SAAS:SAAS00245445}; EC=6.3.3.1 {ECO:0000256|RuleBase:RU004370, ECO:0000256|SAAS:SAAS00245411};; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Phosphoribosylformylglycinamidine cyclo-ligase n=4 Tax=Erysipelotrichaceae RepID=B0N3F7_9FIRM
hypothetical protein
L1_008_000M1_scaffold_112_8
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5351..6097
DNA (747bp) protein (249aa)
Cof family hydrolase {ECO:0000313|EMBL:CEQ21201.1}; EC=3.-.-.- {ECO:0000313|EMBL:CEQ21201.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
HAD hydrolase, IIB family protein n=1 Tax=Clostridium sordellii ATCC 9714 RepID=T0E1Y4_CLOSO
HAD-superfamily hydrolase
L1_008_000M1_scaffold_112_9
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(6122..6730)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1ANA5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45753.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L1_008_000M1_scaffold_112_10
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6891..7322
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VN20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC95674.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
MutT-like (Nudix) hydrolase
L1_008_000M1_scaffold_112_11
unknown

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7356..7571
DNA (216bp) protein (72aa)

This feature has no annotations

L1_008_000M1_scaffold_112_12
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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7833..8612
DNA (780bp) protein (260aa)
Uncharacterized phosphatase YwpJ {ECO:0000313|EMBL:CRH80401.1}; EC=3.1.3.- {ECO:0000313|EMBL:CRH80401.1};; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
Cof-like hydrolase n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R877_9FIRM
haloacid dehalogenase
L1_008_000M1_scaffold_112_13
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8692..8844)
DNA (153bp) protein (51aa)
4Fe-4S binding domain protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EQZ4_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDE05334.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
Predicted oxidoreductases of the aldo/keto reductase family
L1_008_000M1_scaffold_112_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8864..9127)
DNA (264bp) protein (88aa)
4Fe-4S binding domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5E5_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EEU96833.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
aldo/keto reductase
L1_008_000M1_scaffold_112_15
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9382..10251
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q425_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23263.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_008_000M1_scaffold_112_16
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10391..11515
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QA53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23264.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
aldo/keto reductase
L1_008_000M1_scaffold_112_17
unknown

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11788..11925
DNA (138bp) protein (46aa)

This feature has no annotations

L1_008_000M1_scaffold_112_18
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11974..12213
DNA (240bp) protein (80aa)
UPI0002EC71B6 related cluster n=1 Tax=unknown RepID=UPI0002EC71B6
Electron transport complex subunit RsxC {ECO:0000313|EMBL:KJJ66272.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
L1_008_000M1_scaffold_112_19
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12418..12825
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q375_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23265.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_008_000M1_scaffold_112_20
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12978..13781
DNA (804bp) protein (268aa)
TIGR00268 family protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QM52_9FIRM
TIGR00268 family protein {ECO:0000313|EMBL:CCZ23266.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_008_000M1_scaffold_112_21
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13744..14490
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23267.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
L1_008_000M1_scaffold_112_22
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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14490..15284
DNA (795bp) protein (265aa)
UPF0272 protein CLORAM_00898 n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q430_9FIRM
UPF0272 protein CLORAM_00898 {ECO:0000313|EMBL:CCZ23268.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_008_000M1_scaffold_112_23
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15287..15685
DNA (399bp) protein (133aa)
UPF0272 protein HMPREF1021_01322 n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QA62_9FIRM
UPF0272 protein HMPREF1021_01322 {ECO:0000313|EMBL:CCZ23269.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_008_000M1_scaffold_112_24
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15696..16403
DNA (708bp) protein (236aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q380_9FIRM
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:CCZ23270.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L1_008_000M1_scaffold_112_25
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16403..17341
DNA (939bp) protein (313aa)
ABC-type dipeptide/oligopeptide/nickel transport systems permease components n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QM56_9FIRM
ABC-type dipeptide/oligopeptide/nickel transport systems permease components {ECO:0000313|EMBL:CCZ23271.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L1_008_000M1_scaffold_112_26
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17319..18131
DNA (813bp) protein (271aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQH7_9FIRM
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CCZ23272.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
binding-protein-dependent transport system inner membrane protein
L1_008_000M1_scaffold_112_27
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18128..19645
DNA (1518bp) protein (506aa)
ABC-type dipeptide transport system periplasmic component n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q435_9FIRM
ABC-type dipeptide transport system periplasmic component {ECO:0000313|EMBL:CCZ23273.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ABC-type dipeptide transport system, periplasmic component
L1_008_000M1_scaffold_112_28
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19642..20373
DNA (732bp) protein (244aa)
ABC transporter ATP-binding protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QA76_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCZ23274.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
L1_008_000M1_scaffold_112_29
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20387..21115
DNA (729bp) protein (243aa)
Oligopeptide ABC superfamily ATP binding cassette transporter ABC protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q386_9FIRM
Oligopeptide ABC superfamily ATP binding cassette transporter ABC protein {ECO:0000313|EMBL:CCZ23275.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_008_000M1_scaffold_112_30
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21216..21836
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QM60_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23276.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
Displaying items 1-30 of 115 in total

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