ggKbase home page

L1_008_000M1_scaffold_137

Search features with annotation key words

Displaying items 61-88 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_137_61
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

72789..73862
DNA (1074bp) protein (358aa)
Branched-chain amino acid ABC transporter, permease protein n=2 Tax=Bifidobacterium RepID=C0BVG0_9BIFI
ABC transporter permease component {ECO:0000313|EMBL:BAR03329.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
araH1; arah1
L1_008_000M1_scaffold_137_62
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

73859..74887
DNA (1029bp) protein (343aa)
Branched-chain amino acid ABC transporter, permease protein n=2 Tax=Bifidobacterium RepID=C0BVG1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16580.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
inner-membrane translocator
L1_008_000M1_scaffold_137_63
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

75316..76869
DNA (1554bp) protein (518aa)
Lincomycin resistance protein LmrB n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4Z1_BIFAD
MFS superfamily transporter {ECO:0000313|EMBL:KFI89407.1}; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
efflux-type transporter
L1_008_000M1_scaffold_137_64
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

76959..77579
DNA (621bp) protein (207aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
ATP-dependent Clp protease proteolytic subunit n=5 Tax=Bifidobacterium RepID=A1A0Y5_BIFAA
clp1; ATP-dependent Clp protease proteolytic subunit 2
L1_008_000M1_scaffold_137_65
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

77582..78283
DNA (702bp) protein (234aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4Z3_BIFAD
ATP-dependent Clp protease proteolytic subunit 1
L1_008_000M1_scaffold_137_66
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

78388..79701
DNA (1314bp) protein (438aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4Z4_BIFAD
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
ATP-dependent protease ATP-binding subunit ClpX
L1_008_000M1_scaffold_137_67
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

80170..81531
DNA (1362bp) protein (454aa)
Na(+)/H(+) antiporter NhaA n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4Z6_BIFAD
putative sodium/proton antiporter
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_137_68
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(81627..82298)
DNA (672bp) protein (224aa)
O-methyltransferase n=3 Tax=root RepID=A7A4Z7_BIFAD
putative methyltransferase
O-methyltransferase {ECO:0000313|EMBL:CCY19294.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L1_008_000M1_scaffold_137_69
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(82300..83217)
DNA (918bp) protein (306aa)
Succinate dehydrogenase and fumarate reductase iron-sulfur protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GPU6_9BIFI
putative iron sulfur protein associated with succinate dehydrogenase
(2Fe-2S)-binding protein {ECO:0000313|EMBL:KIM01438.1}; Putative iron sulfur protein associated with succinate dehydrogenase {ECO:0000313|EMBL:AJE05610.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_137_70
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(83276..85108)
DNA (1833bp) protein (611aa)
Succinate dehydrogenase flavoprotein subunit n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H3A9_9BIFI
Succinate dehydrogenase flavoprotein subunit {ECO:0000313|EMBL:AJE05611.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
succinate dehydrogenase flavoprotein subunit
L1_008_000M1_scaffold_137_71
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(85201..86505)
DNA (1305bp) protein (435aa)
Putative DNA protecting protein DprA n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A500_BIFAD
DNA processing protein DprA {ECO:0000313|EMBL:KIM01440.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
hypothetical protein
L1_008_000M1_scaffold_137_72
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(86502..88031)
DNA (1530bp) protein (510aa)
Mg chelatase-like protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A501_BIFAD
hypothetical protein
ATPase AAA {ECO:0000313|EMBL:KIM01441.1}; Mg chelatase-like protein {ECO:0000313|EMBL:AII76032.1}; Uncharacterized protein {ECO:0000313|EMBL:AJE05613.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_137_73
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(88031..88483)
DNA (453bp) protein (151aa)
UPF0102 protein BAD_0596 n=3 Tax=Bifidobacterium RepID=Y596_BIFAA
hypothetical protein
UPF0102 protein BIFADO_00917 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L1_008_000M1_scaffold_137_74
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(88653..89528)
DNA (876bp) protein (292aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Possible pyridoxine kinase n=2 Tax=Bifidobacterium adolescentis RepID=A1A0Z5_BIFAA
putative pyridoxine kinase
L1_008_000M1_scaffold_137_75
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

89859..91169
DNA (1311bp) protein (437aa)
O-acetylhomoserine (Thiol)-lyase {ECO:0000313|EMBL:KFI96778.1}; EC=2.5.1.49 {ECO:0000313|EMBL:KFI96778.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
O-acetylhomoserine (Thiol)-lyase n=2 Tax=Bifidobacterium adolescentis RepID=A1A0Z6_BIFAA
O-acetylhomoserine (thiol)-lyase
L1_008_000M1_scaffold_137_76
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

91403..91954
DNA (552bp) protein (184aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A506_BIFAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE05617.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_137_77
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

92112..93737
DNA (1626bp) protein (542aa)
ABC-type cobalt transport system, ATPase component n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0Z8_BIFAA
ABC-type cobalt transport system, ATPase component
ABC-type cobalt transport system, ATPase component {ECO:0000313|EMBL:AJE05618.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_137_78
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

93737..94549
DNA (813bp) protein (271aa)
Cobalt transport protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A508_BIFAD
cobalt transport protein
Cobalt transport protein {ECO:0000313|EMBL:KFI96781.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L1_008_000M1_scaffold_137_79
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

94559..95578
DNA (1020bp) protein (340aa)
Transcriptional regulator AsnC family n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GU16_9BIFI
Transcriptional regulator AsnC family {ECO:0000313|EMBL:CCY19269.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
regulatory protein
L1_008_000M1_scaffold_137_80
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

95752..96543
DNA (792bp) protein (264aa)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:KFI89390.1}; EC=3.6.3.28 {ECO:0000313|EMBL:KFI89390.1};; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
ABC transporter ATP-binding protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H2S7_9BIFI
ABC transporter ATP-binding protein
L1_008_000M1_scaffold_137_81
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

96585..99227
DNA (2643bp) protein (881aa)
Efflux ABC transporter, permease protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A511_BIFAD
SalY-type ABC antimicrobial peptide transport system permease component {ECO:0000313|EMBL:AII76041.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
SalY-type ABC antimicrobial peptide transport system permease component
L1_008_000M1_scaffold_137_82
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(99401..100150)
DNA (750bp) protein (250aa)
Response regulator of two-component system {ECO:0000313|EMBL:KFI96785.1}; EC=3.1.1.61 {ECO:0000313|EMBL:KFI96785.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Response regulator of two-component system n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A103_BIFAA
response regulator of two-component system
L1_008_000M1_scaffold_137_83
Bifidobacterium angulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(100226..102835)
DNA (2610bp) protein (870aa)
Histidine kinase n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FFF2_9BIFI
Histidine kinase {ECO:0000313|EMBL:KJX91435.1}; TaxID=1683 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium angulatum.;"
histidine kinase sensor of two-component system
L1_008_000M1_scaffold_137_84
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

103013..104356
DNA (1344bp) protein (448aa)
Proline iminopeptidase {ECO:0000313|EMBL:KFI89386.1}; EC=3.4.11.5 {ECO:0000313|EMBL:KFI89386.1};; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
Hydrolase, alpha/beta domain protein n=2 Tax=Bifidobacterium RepID=C0BVI7_9BIFI
proline iminopeptidase
L1_008_000M1_scaffold_137_85
Bifidobacterium angulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

104444..105244
DNA (801bp) protein (267aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1683 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium angulatum.;"
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FFF0_9BIFI
L1_008_000M1_scaffold_137_86
Bifidobacterium angulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

105462..106556
DNA (1095bp) protein (365aa)
Ribosome-binding ATPase YchF n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FFE8_9BIFI
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=518635 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium angulatum DSM 20098 = JCM 7096.;"
GTP-dependent nucleic acid-binding protein EngD
L1_008_000M1_scaffold_137_87
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(106804..107169)
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=S3DLG8_BIFLN
Membrane protein {ECO:0000313|EMBL:KEY22067.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
hypothetical protein
L1_008_000M1_scaffold_137_88
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

107462..107572
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CQN3_BIFBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAR03358.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Displaying items 61-88 of 88 in total

View Taxonomy