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L1_008_000M1_scaffold_137

Search features with annotation key words

Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_137_1
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..943
DNA (942bp) protein (314aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=6 Tax=Bifidobacterium RepID=EFTU_BIFAA
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L1_008_000M1_scaffold_137_2
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1124..1687
DNA (564bp) protein (188aa)
Elongation factor P n=2 Tax=Bifidobacterium RepID=A7A4T3_BIFAD
Translation elongation factor P
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_137_3
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1709..2152
DNA (444bp) protein (148aa)
N utilization substance protein B homolog n=2 Tax=Bifidobacterium RepID=A7A4T4_BIFAD
Transcription termination protein NusB
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_137_4
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2267..3457
DNA (1191bp) protein (397aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Carbamoyl-phosphate synthase small chain n=2 Tax=Bifidobacterium RepID=R5GPP4_9BIFI
carbamoyl phosphate synthase small subunit
L1_008_000M1_scaffold_137_5
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3450..6830
DNA (3381bp) protein (1127aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Carbamoyl-phosphate synthase large chain n=2 Tax=Bifidobacterium RepID=A7A4T6_BIFAD
carbamoyl-phosphate synthase large chain
L1_008_000M1_scaffold_137_6
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6830..7771
DNA (942bp) protein (314aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000313|EMBL:EDN83920.1}; EC=4.1.1.23 {ECO:0000313|EMBL:EDN83920.1};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Orotidine 5'-phosphate decarboxylase n=2 Tax=Bifidobacterium adolescentis RepID=A7A4T7_BIFAD
orotidine 5'-phosphate decarboxylase
L1_008_000M1_scaffold_137_7
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7832..8419
DNA (588bp) protein (196aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Guanylate kinase n=2 Tax=Bifidobacterium RepID=A7A4T8_BIFAD
guanylate kinase
L1_008_000M1_scaffold_137_8
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8507..9502)
DNA (996bp) protein (332aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Dihydroxy-acid dehydratase n=2 Tax=Bifidobacterium adolescentis RepID=ILVD_BIFAA
dihydroxy-acid dehydratase
L1_008_000M1_scaffold_137_9
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9634..10290
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida S11 RepID=J8V3X8_PSEPU
Uncharacterized protein {ECO:0000313|EMBL:EJT84489.1}; TaxID=1218169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida S11.;"
L1_008_000M1_scaffold_137_10
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10310..10810
DNA (501bp) protein (167aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega n=4 Tax=root RepID=RPOZ_BIFAA
L1_008_000M1_scaffold_137_11
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10984..12198
DNA (1215bp) protein (405aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
S-adenosylmethionine synthase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H347_9BIFI
S-adenosylmethionine synthetase
L1_008_000M1_scaffold_137_12
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12239..14488
DNA (2250bp) protein (750aa)
Probable primosomal protein N n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H3L0_9BIFI
Primosome assembly protein PriA {ECO:0000313|EMBL:KFI96722.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
primosome assembly protein PriA
L1_008_000M1_scaffold_137_13
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14525..15265
DNA (741bp) protein (247aa)
HAD hydrolase family IA variant 3 n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H3K2_9BIFI
HAD hydrolase family IA variant 3 {ECO:0000313|EMBL:CCY19381.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
alpha beta hydrolase
L1_008_000M1_scaffold_137_14
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15370..16332
DNA (963bp) protein (321aa)
Methionyl-tRNA formyltransferase {ECO:0000255|HAMAP-Rule:MF_00182}; EC=2.1.2.9 {ECO:0000255|HAMAP-Rule:MF_00182};; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
Methionyl-tRNA formyltransferase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=FMT_BIFAA
fmt; methionyl-tRNA formyltransferase
L1_008_000M1_scaffold_137_15
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16484..17167)
DNA (684bp) protein (228aa)
Phosphoserine phosphatase SerB n=2 Tax=Bifidobacterium RepID=A7A4U5_BIFAD
putative phosphoserine phosphatase
Phosphoserine phosphatase {ECO:0000313|EMBL:AII75982.1}; Putative phosphoserine phosphatase {ECO:0000313|EMBL:AJE05562.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_137_16
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17220..18788
DNA (1569bp) protein (523aa)
AAA ATPase forming ring-shaped complexes n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H329_9BIFI
AAA ATPase forming ring-shaped complexes {ECO:0000256|SAAS:SAAS00017598}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
putative Aaa-family ATPase
L1_008_000M1_scaffold_137_17
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18860..20443
DNA (1584bp) protein (528aa)
Hypothetical proteasome-associated protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0U5_BIFAA
proteasome-associated protein
Hypothetical proteasome-associated protein {ECO:0000313|EMBL:BAF39328.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L1_008_000M1_scaffold_137_18
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20578..21408
DNA (831bp) protein (277aa)
Inositol monophosphatase family protein n=2 Tax=Bifidobacterium RepID=A7A4U8_BIFAD
putative inositol monophosphatase
Inositol monophosphatase family protein {ECO:0000313|EMBL:EDN83931.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L1_008_000M1_scaffold_137_19
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21503..21694
DNA (192bp) protein (64aa)
Prokaryotic ubiquitin-like protein Pup n=3 Tax=Bifidobacterium RepID=PUP_BIFAA
Prokaryotic ubiquitin-like protein Pup
Prokaryotic ubiquitin-like protein Pup {ECO:0000313|EMBL:AII75986.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_137_20
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21694..23160
DNA (1467bp) protein (489aa)
Pup--protein ligase {ECO:0000256|HAMAP-Rule:MF_02111, ECO:0000256|SAAS:SAAS00018320}; EC=6.3.2.n2 {ECO:0000256|HAMAP-Rule:MF_02111, ECO:0000256|SAAS:SAAS00018320};; Proteasome accessory factor A {ECO:0000256|HAMAP-Rule:MF_02111}; Pup-conjugating enzyme {ECO:0000256|HAMAP-Rule:MF_02111}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Pup--protein ligase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4V0_BIFAD
proteasome-associated protein
L1_008_000M1_scaffold_137_21
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23234..24034)
DNA (801bp) protein (267aa)
Uncharacterized protein n=2 Tax=Bifidobacterium adolescentis RepID=A1A0U8_BIFAA
putative 2-keto-3-deoxy-6-phosphogluconate aldolase
2-keto-3-deoxy-6-phosphogluconate aldolase {ECO:0000313|EMBL:KFI96731.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L1_008_000M1_scaffold_137_22
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24031..24390)
DNA (360bp) protein (120aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A4V2_BIFAD
hypothetical protein
MarR family transcriptional regulator {ECO:0000313|EMBL:KIM01948.1}; Uncharacterized protein {ECO:0000313|EMBL:AII75989.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_137_23
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24534..24815)
DNA (282bp) protein (94aa)
DNA-binding protein HB1 n=10 Tax=Bifidobacterium RepID=A1A0V0_BIFAA
DNA-binding protein HU
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ28753.1}; DNA-binding protein HB1 {ECO:0000313|EMBL:KFI66782.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
L1_008_000M1_scaffold_137_24
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24970..27405)
DNA (2436bp) protein (812aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4V4_BIFAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII75991.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_137_25
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27553..28995)
DNA (1443bp) protein (481aa)
Adenylosuccinate lyase {ECO:0000313|EMBL:KIM01961.1}; EC=4.3.2.2 {ECO:0000313|EMBL:KIM01961.1};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Lyase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4V5_BIFAD
adenylosuccinate lyase
L1_008_000M1_scaffold_137_26
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29035..30189)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4V6_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:EDN83939.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
hypothetical protein
L1_008_000M1_scaffold_137_27
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31067..31639)
DNA (573bp) protein (191aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A4V9_BIFAD
cell surface elastin binding protein EbpS
Cell surface elastin binding protein EbpS {ECO:0000313|EMBL:AJE05575.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_137_28
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31636..32655)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A1A0V6_BIFAA
hypothetical protein
von Willebrand factor A {ECO:0000313|EMBL:KFI96738.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L1_008_000M1_scaffold_137_29
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32652..33719)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A4W1_BIFAD
von Willebrand factor A {ECO:0000313|EMBL:KFI96739.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L1_008_000M1_scaffold_137_30
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33720..34244)
DNA (525bp) protein (175aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A1A0V8_BIFAA
Uncharacterized protein {ECO:0000313|EMBL:KFI96740.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
Displaying items 1-30 of 88 in total

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