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L1_008_000M1_scaffold_159

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_159_1
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(66..200)
DNA (135bp) protein (45aa)
Signal transduction histidine kinase n=1 Tax=Roseburia sp. CAG:471 RepID=R7EFK4_9FIRM
Signal transduction histidine kinase {ECO:0000313|EMBL:CDE01073.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
L1_008_000M1_scaffold_159_2
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

Not on your lists

469..1026
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:534 RepID=R7A5F2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD48606.1}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
L1_008_000M1_scaffold_159_3
unknown

Not on your lists

1030..1455
DNA (426bp) protein (142aa)

This feature has no annotations

L1_008_000M1_scaffold_159_4
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1452..2054
DNA (603bp) protein (201aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5NMT6_9CLOT
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:CCZ05475.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
L1_008_000M1_scaffold_159_5
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2220..2894
DNA (675bp) protein (225aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=2 Tax=Clostridiales RepID=D7GQH2_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CCY09200.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L1_008_000M1_scaffold_159_6
Firmicutes bacterium CAG:822, Firmicutes, Bacteria

Not on your lists

comp(2960..3580)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5JCQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY46582.1}; TaxID=1263032 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:822.;"
hypothetical protein
L1_008_000M1_scaffold_159_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3580..4767)
DNA (1188bp) protein (396aa)
Beta-lactamase n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GF27_9FIRM
Beta-lactamase class C and other penicillin binding proteins
Beta-lactamase {ECO:0000313|EMBL:EEU99577.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L1_008_000M1_scaffold_159_8
unknown

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4943..6280
DNA (1338bp) protein (446aa)

This feature has no annotations

L1_008_000M1_scaffold_159_9
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6325..7287
DNA (963bp) protein (321aa)
Exonuclease family protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TVA4_9CLOT
Exonuclease family protein {ECO:0000313|EMBL:CCZ60827.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Inhibitor of the KinA pathway to sporulation, predicted exonuclease
L1_008_000M1_scaffold_159_10
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

Not on your lists

comp(7311..8681)
DNA (1371bp) protein (457aa)
dacA3; D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-Ala-D-Ala carboxypeptidase n=1 Tax=Butyrivibrio sp. NC2007 RepID=UPI0003B5224C
D-alanyl-D-alanine carboxypeptidase DacA3 {ECO:0000313|EMBL:CDF06796.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
L1_008_000M1_scaffold_159_11
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8807..9901
DNA (1095bp) protein (365aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EEG93606.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEG93606.1};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FV02_9FIRM
glycosyl transferase
L1_008_000M1_scaffold_159_12
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9898..10692
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6BCS6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA58624.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
glycosyltransferase
L1_008_000M1_scaffold_159_13
Catenibacterium sp. CAG:290, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10725..12179
DNA (1455bp) protein (485aa)
Polysaccharide biosynthesis protein n=1 Tax=Catenibacterium sp. CAG:290 RepID=R7GPB3_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDE28955.1}; TaxID=1262767 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium; environmental samples.;" source="Catenibacterium sp. CAG:290.;"
hypothetical protein
L1_008_000M1_scaffold_159_14
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12675..13325)
DNA (651bp) protein (217aa)
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000255|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01057}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=TRMB_CLOPH
L1_008_000M1_scaffold_159_15
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13336..13959)
DNA (624bp) protein (208aa)
Cytidylate kinase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G769_CLOPA
Cytidylate kinase {ECO:0000313|EMBL:ETD71823.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
hypothetical protein
L1_008_000M1_scaffold_159_16
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14232..14543
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5I9J8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61737.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L1_008_000M1_scaffold_159_17
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

14592..15647
DNA (1056bp) protein (352aa)
Archaeal/vacuolar-type H+-ATPase subunit C (EC:3.6.3.14)
ATP synthase subunit n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R4G2_9FIRM
ATP synthase subunit {ECO:0000313|EMBL:CCZ33614.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L1_008_000M1_scaffold_159_18
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15700..17625
DNA (1926bp) protein (642aa)
Putative V-type sodium ATP synthase subunit I n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T6B4_9CLOT
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
V-type ATPase 116 kDa subunit
L1_008_000M1_scaffold_159_19
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17719..18156
DNA (438bp) protein (146aa)
ATP synthase subunit C. (EC:3.6.3.14)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=E9RXK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74161.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
L1_008_000M1_scaffold_159_20
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18193..18501
DNA (309bp) protein (103aa)
Archaeal/vacuolar-type H+-ATPase subunit F (EC:3.6.3.14)
ATP synthase, subunit F n=2 Tax=Clostridiales RepID=A5ZRD2_9FIRM
ATP synthase, subunit F {ECO:0000313|EMBL:EDM87750.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
L1_008_000M1_scaffold_159_21
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18701..19291
DNA (591bp) protein (197aa)
V-type proton ATPase subunit E n=2 Tax=Clostridium RepID=R5T5B9_9CLOT
V-type proton ATPase subunit E {ECO:0000313|EMBL:CCZ61085.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L1_008_000M1_scaffold_159_22
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19281..21053
DNA (1773bp) protein (591aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
Archaeal/vacuolar-type H+-ATPase subunit A (EC:3.6.3.14)
V-type ATP synthase alpha chain n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NS28_9FIRM
L1_008_000M1_scaffold_159_23
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

21066..22475
DNA (1410bp) protein (470aa)
Archaeal/vacuolar-type H+-ATPase subunit B (EC:3.6.3.14)
V-type ATP synthase beta chain n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QYT7_9FIRM
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L1_008_000M1_scaffold_159_24
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22496..23116
DNA (621bp) protein (207aa)
H(+)-transporting ATP synthase, vacuolar type, subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NP86_9FIRM
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L1_008_000M1_scaffold_159_25
Lactobacillus sp. wkB8, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23200..24225)
DNA (1026bp) protein (342aa)
Alpha-L-fucosidase (EC:3.2.1.51)
Alpha-L-fucosidase {ECO:0000313|EMBL:AIS08437.1}; EC=3.2.1.51 {ECO:0000313|EMBL:AIS08437.1};; TaxID=1545702 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus sp. wkB8.;"
Alpha-L-fucosidase (GH29) (Fragment) n=1 Tax=Lactobacillus rhamnosus MTCC 5462 RepID=F3MVN2_LACRH
L1_008_000M1_scaffold_159_26
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24276..25454)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B6F7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI67368.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
oligogalacturonate lyase
L1_008_000M1_scaffold_159_27
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

Not on your lists

25544..26155
DNA (612bp) protein (204aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
Shikimate kinase n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N3S9_9FIRM
shikimate kinase
L1_008_000M1_scaffold_159_28
Catenibacterium sp. CAG:290, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26156..26986)
DNA (831bp) protein (277aa)
EDD domain protein DegV family n=1 Tax=Catenibacterium sp. CAG:290 RepID=R7GR85_9FIRM
EDD domain protein DegV family {ECO:0000313|EMBL:CDE28472.1}; TaxID=1262767 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium; environmental samples.;" source="Catenibacterium sp. CAG:290.;"
hypothetical protein
L1_008_000M1_scaffold_159_29
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27139..27333)
DNA (195bp) protein (65aa)
BFD-like [2Fe-2S] binding domain n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LF76_RUMC1
BFD-like [2Fe-2S] binding domain.
BFD-like [2Fe-2S] binding domain {ECO:0000313|EMBL:CBL18271.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
L1_008_000M1_scaffold_159_30
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27369..27914)
DNA (546bp) protein (182aa)
Rubrerythrin n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LVU6_9FIRM
Rubrerythrin
Rubrerythrin {ECO:0000313|EMBL:CBL21749.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
Displaying items 1-30 of 72 in total

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