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L1_008_000M1_scaffold_180

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_180_1
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(100..933)
DNA (834bp) protein (278aa)
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family {ECO:0000313|EMBL:CBK96381.1}; EC=5.2.1.8 {ECO:0000313|EMBL:CBK96381.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family n=3 Tax=root RepID=D4JTG2_9FIRM
L1_008_000M1_scaffold_180_2
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1078..2112)
DNA (1035bp) protein (345aa)
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTG3_9FIRM
L1_008_000M1_scaffold_180_3
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2357..3922
DNA (1566bp) protein (522aa)
HAD hydrolase family IIB n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RHA9_9FIRM
HAD hydrolase family IIB {ECO:0000313|EMBL:CDC47160.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
HAD-superfamily hydrolase, subfamily IIB
L1_008_000M1_scaffold_180_4
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4312..4935)
DNA (624bp) protein (208aa)
Response regulator receiver domain protein n=2 Tax=Eubacterium RepID=B0ML96_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CDC44267.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L1_008_000M1_scaffold_180_5
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4932..6053)
DNA (1122bp) protein (374aa)
Histidine kinase n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RG16_9FIRM
Histidine kinase {ECO:0000313|EMBL:CDC44269.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
histidine kinase dimerization and phosphoacceptor region
L1_008_000M1_scaffold_180_6
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6069..7205)
DNA (1137bp) protein (379aa)
ABC-2 type transporter n=2 Tax=root RepID=R6RMJ1_9FIRM
ABC-2 type transporter {ECO:0000313|EMBL:CDC44271.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
ABC-type multidrug transport system, permease component
L1_008_000M1_scaffold_180_7
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7220..8314)
DNA (1095bp) protein (365aa)
ABC-2 type transporter n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0ML93_9FIRM
ABC-2 type transporter {ECO:0000313|EMBL:EDS01499.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
ABC-2 type transporter.
L1_008_000M1_scaffold_180_8
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8326..9270)
DNA (945bp) protein (315aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MM28_9FIRM
ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:CBL34811.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L1_008_000M1_scaffold_180_9
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9843..12437)
DNA (2595bp) protein (865aa)
X-X-X-Leu-X-X-Gly heptad repeats n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTG7_9FIRM
X-X-X-Leu-X-X-Gly heptad repeats
X-X-X-Leu-X-X-Gly heptad repeats {ECO:0000313|EMBL:CBK96386.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_180_10
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12452..14542)
DNA (2091bp) protein (697aa)
Predicted exporters of the RND superfamily n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MM26_9FIRM
Predicted exporters of the RND superfamily
Predicted exporters of the RND superfamily {ECO:0000313|EMBL:CBL34809.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L1_008_000M1_scaffold_180_11
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14535..15134)
DNA (600bp) protein (200aa)
Uncharacterized conserved protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MM25_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBL34808.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L1_008_000M1_scaffold_180_12
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15364..15927
DNA (564bp) protein (188aa)
Putative dihydroxyacetone kinase regulator n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6SCE5_9FIRM
Putative dihydroxyacetone kinase regulator {ECO:0000313|EMBL:CDC44277.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Transcriptional regulator
L1_008_000M1_scaffold_180_13
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16125..17087
DNA (963bp) protein (321aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=B0ML87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS01493.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Tim44-like domain.
L1_008_000M1_scaffold_180_14
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17089..17853
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RG26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44279.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L1_008_000M1_scaffold_180_15
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17886..19277
DNA (1392bp) protein (464aa)
Uncharacterized protein n=2 Tax=root RepID=B0ML85_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS01491.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Putative virion core protein (lumpy skin disease virus)
L1_008_000M1_scaffold_180_16
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19323..20462
DNA (1140bp) protein (380aa)
Na+/H+ antiporter NhaD and related arsenite permeases n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTH3_9FIRM
Na+/H+ antiporter NhaD and related arsenite permeases
Na+/H+ antiporter NhaD and related arsenite permeases {ECO:0000313|EMBL:CBK96392.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_180_17
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20439..21230)
DNA (792bp) protein (264aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MM20_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL34803.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L1_008_000M1_scaffold_180_18
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21995..22606)
DNA (612bp) protein (204aa)
Uncharacterized protein n=4 Tax=Eubacterium RepID=B0MNR2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC46177.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L1_008_000M1_scaffold_180_19
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22621..22962)
DNA (342bp) protein (114aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=R6REE0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC46180.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L1_008_000M1_scaffold_180_20
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22982..23458)
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTH7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC46181.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L1_008_000M1_scaffold_180_21
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23455..24570)
DNA (1116bp) protein (372aa)
Stage III sporulation protein AE (Spore_III_AE) n=2 Tax=Eubacterium siraeum RepID=D4JTH8_9FIRM
Stage III sporulation protein AE (spore_III_AE).
Stage III sporulation protein AE (Spore_III_AE) {ECO:0000313|EMBL:CBL34799.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L1_008_000M1_scaffold_180_22
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24577..24963)
DNA (387bp) protein (129aa)
Stage III sporulation protein AC/AD protein family n=3 Tax=Eubacterium RepID=D4JTH9_9FIRM
Stage III sporulation protein AC/AD protein family.
Stage III sporulation protein AC/AD protein family {ECO:0000313|EMBL:CBK96398.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_180_23
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24987..25181)
DNA (195bp) protein (65aa)
Stage III sporulation protein AC n=4 Tax=Eubacterium RepID=D4JTI0_9FIRM
stage III sporulation protein AC
Stage III sporulation protein AC {ECO:0000313|EMBL:CDC46186.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L1_008_000M1_scaffold_180_24
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25198..25701)
DNA (504bp) protein (168aa)
Stage III sporulation protein AB (Spore_III_AB) n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTI1_9FIRM
Stage III sporulation protein AB (spore_III_AB).
Stage III sporulation protein AB (Spore_III_AB) {ECO:0000313|EMBL:CBK96400.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_180_25
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25698..26600)
DNA (903bp) protein (301aa)
Putative stage III sporulation protein AA n=2 Tax=Eubacterium RepID=B0MNQ5_9FIRM
Putative stage III sporulation protein AA {ECO:0000313|EMBL:EDS00767.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L1_008_000M1_scaffold_180_26
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(26726..28504)
DNA (1779bp) protein (593aa)
Aspartate--tRNA ligase {ECO:0000313|EMBL:EDS00766.1}; EC=6.1.1.12 {ECO:0000313|EMBL:EDS00766.1};; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MNQ4_9FIRM
L1_008_000M1_scaffold_180_27
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28811..29359)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RLK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC46194.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
hypothetical protein
L1_008_000M1_scaffold_180_28
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29356..30444)
DNA (1089bp) protein (363aa)
Beta-mannanase (EC:3.2.1.78)
Beta-mannanase {ECO:0000313|EMBL:CBK96404.1}; EC=3.2.1.78 {ECO:0000313|EMBL:CBK96404.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Beta-mannanase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTI5_9FIRM
L1_008_000M1_scaffold_180_29
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30464..31234)
DNA (771bp) protein (257aa)
Short-chain dehydrogenases of various substrate specificities n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTI6_9FIRM
Short-chain dehydrogenases of various substrate specificities
Short-chain dehydrogenases of various substrate specificities {ECO:0000313|EMBL:CBK96405.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_180_30
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31236..31709)
DNA (474bp) protein (158aa)
C_GCAxxG_C_C family probable redox protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTI7_9FIRM
C_GCAxxG_C_C family probable redox protein
C_GCAxxG_C_C family probable redox protein {ECO:0000313|EMBL:CBK96406.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Displaying items 1-30 of 78 in total

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