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L1_008_000M1_scaffold_196

Search features with annotation key words

Displaying items 31-60 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_196_31
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(29137..30357)
DNA (1221bp) protein (407aa)
Beta-lactamase domain-containing protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HP28_9FIRM
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:CCY26562.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
copper amine oxidase domain-containing protein
L1_008_000M1_scaffold_196_32
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(30463..31542)
DNA (1080bp) protein (360aa)
S55 family peptidase (EC:3.4.21.-)
SpoIVB peptidase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HAQ1_9FIRM
SpoIVB peptidase {ECO:0000313|EMBL:CCY26563.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L1_008_000M1_scaffold_196_33
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

31886..32155
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HEP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26564.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L1_008_000M1_scaffold_196_34
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

32210..32863
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HA75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26565.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L1_008_000M1_scaffold_196_35
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32980..34023)
DNA (1044bp) protein (348aa)
Cell shape determining protein, MreB/Mrl family n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZ77_9FIRM
Cell shape determining protein, MreB/Mrl family {ECO:0000313|EMBL:EDM98726.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
mreB; rod shape-determining protein MreB
L1_008_000M1_scaffold_196_36
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34121..34786)
DNA (666bp) protein (222aa)
ComF family protein n=2 Tax=Clostridiales RepID=G9YW98_9FIRM
ComF family protein {ECO:0000313|EMBL:EHO34711.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L1_008_000M1_scaffold_196_37
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34728..37022)
DNA (2295bp) protein (765aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Helicase, RecD/TraA family n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZ80_9FIRM
putative nuclease
L1_008_000M1_scaffold_196_38
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(37003..37353)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HG38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY27044.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L1_008_000M1_scaffold_196_39
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(37438..40263)
DNA (2826bp) protein (942aa)
UvrABC system protein A n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HC17_9FIRM
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
uvrA; UvrABC system protein A
L1_008_000M1_scaffold_196_40
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(40287..40778)
DNA (492bp) protein (164aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HQG4_9FIRM
ybaK/ebsC protein
L1_008_000M1_scaffold_196_41
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(40783..41685)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HRE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY27041.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L1_008_000M1_scaffold_196_42
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(41828..43807)
DNA (1980bp) protein (660aa)
UvrABC system protein B n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HBI6_9FIRM
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
uvrB; UvrABC system protein B
L1_008_000M1_scaffold_196_43
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(43842..44522)
DNA (681bp) protein (227aa)
DNA repair protein RadC n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HG36_9FIRM
DNA repair protein RadC {ECO:0000313|EMBL:CCY27039.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
DNA repair protein RadC
L1_008_000M1_scaffold_196_44
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

44725..45405
DNA (681bp) protein (227aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
trmB; tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HC13_9FIRM
L1_008_000M1_scaffold_196_45
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(45553..46674)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HQG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY27037.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L1_008_000M1_scaffold_196_46
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(46777..47943)
DNA (1167bp) protein (389aa)
Toxic anion resistance protein TelA n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HRD7_9FIRM
Toxic anion resistance protein TelA {ECO:0000313|EMBL:CCY27036.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L1_008_000M1_scaffold_196_47
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(47959..48678)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HBI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY27035.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L1_008_000M1_scaffold_196_48
unknown

Not on your lists

48918..49172
DNA (255bp) protein (85aa)

This feature has no annotations

L1_008_000M1_scaffold_196_49
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

49179..49826
DNA (648bp) protein (216aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
rpe; ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NPP5_9FIRM
L1_008_000M1_scaffold_196_50
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

49894..50496
DNA (603bp) protein (201aa)
Recombination protein RecR n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HG33_9FIRM
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
recR; recombination protein RecR
L1_008_000M1_scaffold_196_51
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(50597..51076)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0NC62_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EJF42227.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
L1_008_000M1_scaffold_196_52
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(51079..51528)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HC08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY27033.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L1_008_000M1_scaffold_196_53
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(51525..51929)
DNA (405bp) protein (135aa)
Transcriptional regulator PadR family n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HQF9_9FIRM
Transcriptional regulator PadR family {ECO:0000313|EMBL:CCY27032.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L1_008_000M1_scaffold_196_54
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(52290..52946)
DNA (657bp) protein (219aa)
Putative L-ribulose-5-phosphate 4-epimerase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HRD4_9FIRM
Putative L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:CCY27031.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
class II aldolase/adducin family protein
L1_008_000M1_scaffold_196_55
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(52943..54028)
DNA (1086bp) protein (362aa)
Methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:0000256|HAMAP-Rule:MF_01678};; S-methyl-5-thioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
Methylthioribose-1-phosphate isomerase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HBH9_9FIRM
methylthioribose-1-phosphate isomerase
L1_008_000M1_scaffold_196_56
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

54568..55794
DNA (1227bp) protein (409aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
argD; acetylornithine and succinylornithine aminotransferase (EC:2.6.1.81)
Acetylornithine aminotransferase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HG29_9FIRM
L1_008_000M1_scaffold_196_57
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(56020..59487)
DNA (3468bp) protein (1156aa)
Pyruvate carboxylase {ECO:0000256|PIRNR:PIRNR001594}; EC=6.4.1.1 {ECO:0000256|PIRNR:PIRNR001594};; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
Pyruvate carboxylase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HC05_9FIRM
hypothetical protein
L1_008_000M1_scaffold_196_58
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

60001..61410
DNA (1410bp) protein (470aa)
Putative HTH-type transcriptional regulatory protein GabR n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HQF6_9FIRM
Putative HTH-type transcriptional regulatory protein GabR {ECO:0000313|EMBL:CCY27027.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
transcriptional regulator with HTH domain and aminotransferase domain
L1_008_000M1_scaffold_196_59
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

61516..62487
DNA (972bp) protein (324aa)
pta; phosphate acetyltransferase (EC:2.3.1.8)
Phosphate acetyltransferase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HRD0_9FIRM
Phosphate acetyltransferase {ECO:0000313|EMBL:CCY27026.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L1_008_000M1_scaffold_196_60
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(62554..63000)
DNA (447bp) protein (149aa)
DNA-binding helix-turn-helix protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HBH3_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCY27025.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
Predicted transcriptional regulators
Displaying items 31-60 of 78 in total

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