ggKbase home page

L1_008_000M1_scaffold_196

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_196_1
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(191..850)
DNA (660bp) protein (220aa)
GDSL-like protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5H8X6_9FIRM
GDSL-like protein {ECO:0000313|EMBL:CCY25943.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
GDSL-like Lipase/Acylhydrolase
L1_008_000M1_scaffold_196_2
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(1041..1685)
DNA (645bp) protein (215aa)
GDSL-like protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HMF9_9FIRM
GDSL-like protein {ECO:0000313|EMBL:CCY25942.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L1_008_000M1_scaffold_196_3
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

1930..3249
DNA (1320bp) protein (440aa)
Electron transport complex rnfabcdge type C subunit n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HMR0_9FIRM
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
rnfC; electron transport complex protein RnfC
L1_008_000M1_scaffold_196_4
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

3262..4317
DNA (1056bp) protein (352aa)
Electron transport complex RnfABCDGE type D subunit n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5H8B9_9FIRM
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
rnfD; electron transport complex protein RnfD
L1_008_000M1_scaffold_196_5
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

4314..4880
DNA (567bp) protein (189aa)
Electron transport complex rnfabcdge type G subunit n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HCT0_9FIRM
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
rnfG; rnfG/nqrC
L1_008_000M1_scaffold_196_6
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

4896..5531
DNA (636bp) protein (212aa)
Electron transport complex rnfabcdge type E subunit n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5H8W8_9FIRM
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
rnfE; electron transport complex protein RnfE
L1_008_000M1_scaffold_196_7
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

5531..6118
DNA (588bp) protein (196aa)
Electron transport complex rnfabcdge type A subunit n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HMF3_9FIRM
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
rnfA; electron transport complex protein RnfA
L1_008_000M1_scaffold_196_8
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

6138..7112
DNA (975bp) protein (325aa)
Ferredoxin n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HMQ4_9FIRM
Ferredoxin {ECO:0000313|EMBL:CCY25936.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
ferredoxin
L1_008_000M1_scaffold_196_9
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(7224..7409)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5H8B5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY25935.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L1_008_000M1_scaffold_196_10
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

7522..7734
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HCS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY25934.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L1_008_000M1_scaffold_196_11
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(7762..8319)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5H8W4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY25933.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L1_008_000M1_scaffold_196_12
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

9439..10530
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HA47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26530.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
putative surface layer protein
L1_008_000M1_scaffold_196_13
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

10695..11495
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HPV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26531.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L1_008_000M1_scaffold_196_14
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(11683..12558)
DNA (876bp) protein (292aa)
Putative LysR family transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HP11_9FIRM
Putative LysR family transcriptional regulator {ECO:0000313|EMBL:CCY26532.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
putative LysR family transcriptional regulator
L1_008_000M1_scaffold_196_15
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

12763..12951
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HAM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26533.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L1_008_000M1_scaffold_196_16
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(13100..13519)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HEM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26534.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L1_008_000M1_scaffold_196_17
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

14148..15158
DNA (1011bp) protein (337aa)
Putative ABC transporter substrate-binding protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HPV9_9FIRM
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:CCY26536.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
putative ABC transporter substrate-binding protein
L1_008_000M1_scaffold_196_18
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

15192..16130
DNA (939bp) protein (313aa)
Putative ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HP14_9FIRM
Putative ABC transporter permease protein {ECO:0000313|EMBL:CCY26537.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
putative ABC transporter permease protein
L1_008_000M1_scaffold_196_19
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

16123..16887
DNA (765bp) protein (255aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HAN3_9FIRM
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCY26538.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
putative ABC transporter ATP-binding protein
L1_008_000M1_scaffold_196_20
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists


comp(17002..17358)
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HEM8_9FIRM
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
rplT; 50S ribosomal protein L20
L1_008_000M1_scaffold_196_21
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists


comp(17393..17596)
DNA (204bp) protein (68aa)
50S ribosomal protein L35 n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HA54_9FIRM
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
LSU ribosomal protein L35P
L1_008_000M1_scaffold_196_22
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(17621..18232)
DNA (612bp) protein (204aa)
Translation initiation factor IF-3 n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HPW2_9FIRM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
infC; translation initiation factor IF-3
L1_008_000M1_scaffold_196_23
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(18508..19275)
DNA (768bp) protein (256aa)
Putative sporulation transcription factor Spo0A n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HP16_9FIRM
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
spo0A; stage 0 sporulation protein A
L1_008_000M1_scaffold_196_24
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

19640..21373
DNA (1734bp) protein (578aa)
Indolepyruvate oxidoreductase subunit IorA {ECO:0000256|PIRNR:PIRNR006439}; Short=IOR {ECO:0000256|PIRNR:PIRNR006439};; EC=1.2.7.8 {ECO:0000256|PIRNR:PIRNR006439};; Indolepyruvate ferredoxin oxidoreductase subunit alpha {ECO:0000256|PIRNR:PIRNR006439}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
iorA; indolepyruvate ferredoxin oxidoreductase alpha subunit IorA (EC:1.2.7.8)
Indolepyruvate ferredoxin oxidoreductase alpha subunit n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HAN7_9FIRM
L1_008_000M1_scaffold_196_25
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21671..23023
DNA (1353bp) protein (451aa)
Citrate transporter n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AQE4_9CLOT
Citrate transporter {ECO:0000313|EMBL:ERI68064.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
possible tyrosine transporter P-protein (TC 2.A.45.2.1)
L1_008_000M1_scaffold_196_26
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

23072..24418
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HA59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26545.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
possible tyrosine transporter P-protein (TC 2.A.45.2.1)
L1_008_000M1_scaffold_196_27
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(24412..25245)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HPW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26546.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
Predicted phosphohydrolases
L1_008_000M1_scaffold_196_28
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25512..26837
DNA (1326bp) protein (442aa)
MATE efflux family protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LF73_9FIRM
Multidrug transporter MatE {ECO:0000313|EMBL:KJF38798.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
multi antimicrobial extrusion protein MatE
L1_008_000M1_scaffold_196_29
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(26894..27361)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HA71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26560.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L1_008_000M1_scaffold_196_30
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(27423..28691)
DNA (1269bp) protein (423aa)
Citrate transporter n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HPX9_9FIRM
Citrate transporter {ECO:0000313|EMBL:CCY26561.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
arsenical pump membrane protein
Displaying items 1-30 of 78 in total

View Taxonomy