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L1_008_000M1_scaffold_198

Search features with annotation key words

Displaying items 1-30 of 104 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_198_1
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7..561)
-----------------
DNA (555bp)
protein (185aa)
Uncharacterized protein n=1 Tax=Sporolactobacillus laevolacticus DSM 442 RepID=V6J1V2_9BACL
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CEO23663.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L1_008_000M1_scaffold_198_2
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(558..794)
-----------------
DNA (237bp)
protein (79aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:52 RepID=R6GG52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB20266.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
L1_008_000M1_scaffold_198_3
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(893..1186)
-----------------
DNA (294bp)
protein (98aa)
MobA/MobL family protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PEM1_9FIRM
MobA/MobL family protein {ECO:0000313|EMBL:EDS09804.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Galactokinase
L1_008_000M1_scaffold_198_4
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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1213..1605
-----------------
DNA (393bp)
protein (131aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EM63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX93795.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
L1_008_000M1_scaffold_198_5
unknown

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1812..3449
-----------------
DNA (1638bp)
protein (546aa)

This feature has no annotations

L1_008_000M1_scaffold_198_6
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3508..4527
-----------------
DNA (1020bp)
protein (340aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5II54_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41848.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
PfkB domain protein
L1_008_000M1_scaffold_198_7
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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4642..5100
-----------------
DNA (459bp)
protein (153aa)
Uncharacterized protein n=1 Tax=Lachnoanaerobaculum saburreum F0468 RepID=I0R8K4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EIC96012.1}; TaxID=1095750 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum F0468.;"
septicolysin
L1_008_000M1_scaffold_198_8
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5693..6598)
-----------------
DNA (906bp)
protein (302aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CHW5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI66931.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L1_008_000M1_scaffold_198_9
Strongylocentrotus purpuratus, Strongylocentrotus, Echinoida, Euechinoidea, Echinodermata, Metazoa

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comp(6703..7647)
-----------------
DNA (945bp)
protein (315aa)
Uncharacterized protein n=1 Tax=Toxoplasma gondii GT1 RepID=S7V0N7_TOXGO
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:SPU_003693-tr}; TaxID=7668 species="Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus.;" source="Strongylocentrotus purpuratus (Purple sea urchin).;"
hypothetical protein
L1_008_000M1_scaffold_198_10
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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7922..8488
-----------------
DNA (567bp)
protein (189aa)
integrase n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B31B57
Site-specific recombinase phage integrase family {ECO:0000313|EMBL:CDC73894.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
phage integrase family protein
L1_008_000M1_scaffold_198_11
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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comp(8583..9974)
-----------------
DNA (1392bp)
protein (464aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EHQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX90849.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
Predicted aminopeptidases
L1_008_000M1_scaffold_198_12
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10036..10824
-----------------
DNA (789bp)
protein (263aa)
Delta-lactam-biosynthetic de-N-acetylase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AWL4_9FIRM
delta-lactam-biosynthetic de-N-acetylase
Delta-lactam-biosynthetic de-N-acetylase {ECO:0000313|EMBL:CDA55405.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_198_13
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10956..11819
-----------------
DNA (864bp)
protein (288aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SY85_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97673.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_008_000M1_scaffold_198_14
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11963..14338
-----------------
DNA (2376bp)
protein (792aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
Phosphoketolase (EC:4.1.2.22)
Probable phosphoketolase n=1 Tax=Eubacterium sp. CAG:86 RepID=R5E7F5_9FIRM
L1_008_000M1_scaffold_198_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14371..15438)
-----------------
DNA (1068bp)
protein (356aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6N6_9FIRM
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CCZ79116.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
AraC-type DNA-binding domain-containing proteins
L1_008_000M1_scaffold_198_16
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15444..16670)
-----------------
DNA (1227bp)
protein (409aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Roseburia sp. CAG:303 RepID=R7IXK8_9FIRM
L1_008_000M1_scaffold_198_17
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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17008..18237
-----------------
DNA (1230bp)
protein (410aa)
glutamate N-acetyltransferase/amino-acid acetyltransferase (EC:2.3.1.35 2.3.1.1)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BGI1_9FIRM
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
L1_008_000M1_scaffold_198_18
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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18286..19188
-----------------
DNA (903bp)
protein (301aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IC64_9CLOT
L1_008_000M1_scaffold_198_19
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

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19216..20397
-----------------
DNA (1182bp)
protein (394aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
Acetylornithine aminotransferase n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DXR2_9FIRM
ArgD; PLP-dependent aminotransferase
L1_008_000M1_scaffold_198_20
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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20482..20919
-----------------
DNA (438bp)
protein (146aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HR82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32263.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_008_000M1_scaffold_198_21
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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21034..21708
-----------------
DNA (675bp)
protein (225aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KNA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34020.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
competence protein ComEA helix-hairpin-helix repeat region
L1_008_000M1_scaffold_198_22
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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21736..22434
-----------------
DNA (699bp)
protein (233aa)
Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain n=1 Tax=Roseburia sp. CAG:197 RepID=R5YDD4_9FIRM
Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain {ECO:0000313|EMBL:CDA25508.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_008_000M1_scaffold_198_23
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22431..23876
-----------------
DNA (1446bp)
protein (482aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
Signal transduction histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BVT3_9CLOT
L1_008_000M1_scaffold_198_24
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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23904..24803
-----------------
DNA (900bp)
protein (300aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ARX6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC95429.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
lipoprotein LpqB
L1_008_000M1_scaffold_198_25
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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24800..27241
-----------------
DNA (2442bp)
protein (814aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K0P4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS39898.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
DNA internalization-related competence protein ComEC/Rec2
L1_008_000M1_scaffold_198_26
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27220..28176)
-----------------
DNA (957bp)
protein (319aa)
Sugar kinases ribokinase family n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZHV1_9CLOT
Sugar kinases ribokinase family {ECO:0000313|EMBL:CDD40541.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Sugar kinases, ribokinase family
L1_008_000M1_scaffold_198_27
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28490..29479
-----------------
DNA (990bp)
protein (330aa)
DNA polymerase III, delta subunit (EC:2.7.7.7)
DNA polymerase III delta subunit n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZN51_9CLOT
DNA polymerase III delta subunit {ECO:0000313|EMBL:CDD44809.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L1_008_000M1_scaffold_198_28
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(29537..29800)
-----------------
DNA (264bp)
protein (88aa)
30S ribosomal protein S20 n=1 Tax=Clostridium sp. CAG:58 RepID=R6RRJ6_9CLOT
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
30S ribosomal protein S20
L1_008_000M1_scaffold_198_29
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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30056..30961
-----------------
DNA (906bp)
protein (302aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000256|HAMAP-Rule:MF_00626}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
GPR endopeptidase (EC:3.4.24.78)
Germination protease n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6SJ76_9FIRM
L1_008_000M1_scaffold_198_30
unknown

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31028..31363
-----------------
DNA (336bp)
protein (112aa)

This feature has no annotations

Displaying items 1-30 of 104 in total

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