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L1_008_000M1_scaffold_201

Search features with annotation key words

Displaying items 31-60 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_201_31
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35132..35974
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A2B9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37170.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
hypothetical protein
L1_008_000M1_scaffold_201_32
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36010..36951
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A3H7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37625.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
hypothetical protein
L1_008_000M1_scaffold_201_33
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36962..38665
DNA (1704bp) protein (568aa)
suc13P; sucrose phosphorylase (EC:2.4.1.7)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RR95_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72445.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_008_000M1_scaffold_201_34
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38792..39376)
DNA (585bp) protein (195aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
SOS-response transcriptional repressor, LexA (EC:3.4.21.88)
LexA repressor n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A7B1_9CLOT
L1_008_000M1_scaffold_201_35
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

39875..40654
DNA (780bp) protein (260aa)
Peptidase M23 family n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YQ50_9FIRM
Peptidase M23 family {ECO:0000313|EMBL:CDD30721.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
peptidase M23
L1_008_000M1_scaffold_201_36
Eubacterium sp. CAG:248, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40830..41270
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:248 RepID=R6KWF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB66422.1}; TaxID=1262885 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:248.;"
Transcriptional regulators
L1_008_000M1_scaffold_201_37
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

41272..42048
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6C0G8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA64936.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
putative transporter
L1_008_000M1_scaffold_201_38
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42123..42776)
DNA (654bp) protein (218aa)
H(+)-transporting ATP synthase, vacuolar type, subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D n=2 Tax=Lachnospiraceae RepID=F3AGH1_9FIRM
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
L1_008_000M1_scaffold_201_39
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42783..44156)
DNA (1374bp) protein (458aa)
Archaeal/vacuolar-type H+-ATPase subunit B (EC:3.6.3.14)
V-type ATP synthase beta chain n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A1A7_9CLOT
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
L1_008_000M1_scaffold_201_40
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44156..45928)
DNA (1773bp) protein (591aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
Archaeal/vacuolar-type H+-ATPase subunit A (EC:3.6.3.14)
V-type ATP synthase alpha chain n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M3K8_9FIRM
L1_008_000M1_scaffold_201_41
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45949..46272)
DNA (324bp) protein (108aa)
ATP synthase, subunit F n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P7V9_9FIRM
ATP synthase, subunit F {ECO:0000313|EMBL:EDS12612.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L1_008_000M1_scaffold_201_42
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46290..47252)
DNA (963bp) protein (321aa)
Archaeal/vacuolar-type H+-ATPase subunit C (EC:3.6.3.14)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A6U8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX36762.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
L1_008_000M1_scaffold_201_43
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47281..47871)
DNA (591bp) protein (197aa)
Archaeal/vacuolar-type H+-ATPase subunit E (EC:3.6.3.14)
V-type proton ATPase subunit E n=1 Tax=Clostridium sp. CAG:1013 RepID=R5ABK0_9CLOT
V-type proton ATPase subunit E {ECO:0000313|EMBL:CCX36761.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
L1_008_000M1_scaffold_201_44
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47918..48415)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A1A4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX36760.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
V-type ATP synthase subunit K
L1_008_000M1_scaffold_201_45
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(48417..50432)
DNA (2016bp) protein (672aa)
Archaeal/vacuolar-type H+-ATPase subunit I (EC:3.6.3.14)
V-type ATPase 116kDa subunit family protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P7W3_9FIRM
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L1_008_000M1_scaffold_201_46
unknown

Not on your lists

comp(50466..50873)
DNA (408bp) protein (136aa)
tolA; membrane protein
L1_008_000M1_scaffold_201_47
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

51112..51576
DNA (465bp) protein (155aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VWL0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC04336.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L1_008_000M1_scaffold_201_48
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

51768..53081
DNA (1314bp) protein (438aa)
Mate efflux family protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YGD9_9FIRM
Mate efflux family protein {ECO:0000313|EMBL:CDD30429.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
MATE efflux family protein
L1_008_000M1_scaffold_201_49
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(53261..54436)
DNA (1176bp) protein (392aa)
Amidohydrolase n=2 Tax=Coprococcus RepID=C0BAH5_9FIRM
Amidohydrolase {ECO:0000313|EMBL:EEG89099.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
amidohydrolase
L1_008_000M1_scaffold_201_50
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(54515..55693)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A6U4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX36757.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
L1_008_000M1_scaffold_201_51
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(55789..59286)
DNA (3498bp) protein (1166aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
mfd; Transcription-repair-coupling factor (EC:3.6.4.-)
Transcription-repair-coupling factor n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y1Y8_9FIRM
L1_008_000M1_scaffold_201_52
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(59312..59914)
DNA (603bp) protein (201aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6ZHY6_9FIRM
L1_008_000M1_scaffold_201_53
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

60374..63010
DNA (2637bp) protein (879aa)
pyruvate, phosphate dikinase (EC:2.7.9.1)
Pyruvate phosphate dikinase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D0C4_9FIRM
Pyruvate phosphate dikinase {ECO:0000313|EMBL:CCX73640.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L1_008_000M1_scaffold_201_54
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

63384..63719
DNA (336bp) protein (112aa)
NUDIX hydrolase n=1 Tax=Clostridium sporosphaeroides RepID=UPI00035D8B8E
NUDIX hydrolase
Nudix hydrolase YfcD {ECO:0000313|EMBL:GAE87887.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
L1_008_000M1_scaffold_201_55
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(63725..64741)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CFN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD25526.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
apbE; thiamin biosynthesis lipoprotein ApbE
L1_008_000M1_scaffold_201_56
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

65118..68636
DNA (3519bp) protein (1173aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YB65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24095.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000M1_scaffold_201_57
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(68563..69039)
DNA (477bp) protein (159aa)
Site-specific recombinase XerC n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LIZ7_9FIRM
Site-specific recombinase XerC
Site-specific recombinase XerC {ECO:0000313|EMBL:CBL19808.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_008_000M1_scaffold_201_58
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

69441..70844
DNA (1404bp) protein (468aa)
Transporter n=1 Tax=Clostridium sp. CAG:590 RepID=R5E5N7_9CLOT
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
Na+-dependent transporters of the SNF family
L1_008_000M1_scaffold_201_59
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

70940..71332
DNA (393bp) protein (131aa)
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily. (EC:4.4.1.5)
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily {ECO:0000313|EMBL:CBK98898.1}; EC=4.4.1.5 {ECO:0000313|EMBL:CBK98898.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Glyoxalase family protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHR6_9FIRM
L1_008_000M1_scaffold_201_60
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(71533..72417)
DNA (885bp) protein (295aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5Y6H4_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDA20429.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
Transcriptional regulator
Displaying items 31-60 of 69 in total

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