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L1_008_000M1_scaffold_201

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_201_1
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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406..945
DNA (540bp) protein (180aa)
QueT transporter n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AHJ1_9CLOT
QueT transporter {ECO:0000313|EMBL:CCX38826.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
hypothetical protein
L1_008_000M1_scaffold_201_2
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

1037..2359
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6XY83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD28718.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
TrkH family potassium uptake protein
L1_008_000M1_scaffold_201_3
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2547..4157
DNA (1611bp) protein (537aa)
Putative transporter n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A971_9CLOT
Putative transporter {ECO:0000313|EMBL:CCX37622.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
Polysaccharide biosynthesis protein
L1_008_000M1_scaffold_201_4
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4248..6047
DNA (1800bp) protein (600aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5ABB7_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCX38362.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
hypothetical protein
L1_008_000M1_scaffold_201_5
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6098..7108
DNA (1011bp) protein (337aa)
Oxidoreductase, aldo/keto reductase family protein n=2 Tax=Erysipelotrichaceae RepID=B0N806_9FIRM
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EDS17944.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
aldo/keto reductase
L1_008_000M1_scaffold_201_6
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7127..8530
DNA (1404bp) protein (468aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AG77_9CLOT
L1_008_000M1_scaffold_201_7
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

8834..11038
DNA (2205bp) protein (735aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
rnr; ribonuclease R (EC: (EC:3.1.-.-)
Ribonuclease R n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YI14_9FIRM
L1_008_000M1_scaffold_201_8
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11100..11279
DNA (180bp) protein (60aa)
Pro-sigmaK processing inhibitor BofA n=2 Tax=Clostridium RepID=A7VVJ9_9CLOT
Pro-sigmaK processing inhibitor BofA {ECO:0000313|EMBL:CDC03462.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
putative membrane protein
L1_008_000M1_scaffold_201_9
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

11340..12455
DNA (1116bp) protein (372aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6ZKS1_9FIRM
L1_008_000M1_scaffold_201_10
unknown

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12533..13543
DNA (1011bp) protein (337aa)

This feature has no annotations

L1_008_000M1_scaffold_201_11
unknown

Not on your lists

comp(13722..13859)
DNA (138bp) protein (46aa)

This feature has no annotations

L1_008_000M1_scaffold_201_12
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13947..14948
DNA (1002bp) protein (334aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
aspartate-ammonia ligase (EC:6.3.1.1)
Aspartate--ammonia ligase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A6Q5_9CLOT
L1_008_000M1_scaffold_201_13
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15099..15860)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A9I2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX38504.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
dehydrogenase
L1_008_000M1_scaffold_201_14
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

16061..17416
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YH76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD30729.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
L1_008_000M1_scaffold_201_15
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17458..18240
DNA (783bp) protein (261aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
MTA/SAH nucleosidase (EC:3.2.2.9)
MTA/SAH nucleosidase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AGP5_9CLOT
L1_008_000M1_scaffold_201_16
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18274..19431
DNA (1158bp) protein (386aa)
Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}; EC=3.2.1.22 {ECO:0000256|RuleBase:RU361168};; Melibiase {ECO:0000256|RuleBase:RU361168}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
Alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y6Q6_9FIRM
L1_008_000M1_scaffold_201_17
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

19431..19634
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YST3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD31641.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
L1_008_000M1_scaffold_201_18
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19736..20584
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JET6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS32729.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
hypothetical protein
L1_008_000M1_scaffold_201_19
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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20581..21444
DNA (864bp) protein (288aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67670.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
acetyltransferase
L1_008_000M1_scaffold_201_20
Paenibacillus riograndensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21502..24060)
DNA (2559bp) protein (853aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI0003671028
glycoside hydrolase family 2 protein
Glycoside hydrolase family 2 protein {ECO:0000313|EMBL:CQR57815.1}; TaxID=1073571 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus riograndensis SBR5.;"
L1_008_000M1_scaffold_201_21
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24082..24735)
DNA (654bp) protein (218aa)
YhhN-like protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G9P9_9FIRM
YhhN-like protein {ECO:0000313|EMBL:EDR46403.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
L1_008_000M1_scaffold_201_22
unknown

Not on your lists

comp(24853..25242)
DNA (390bp) protein (130aa)
hypothetical protein
L1_008_000M1_scaffold_201_23
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25887..27569
DNA (1683bp) protein (561aa)
Glycosidase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A629_9CLOT
Glycosidase {ECO:0000313|EMBL:CCX37164.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
glycosyl hydrolase family 32
L1_008_000M1_scaffold_201_24
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27589..28773
DNA (1185bp) protein (395aa)
Enterochelin esterase and related enzymes n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A2B6_9CLOT
Enterochelin esterase and related enzymes {ECO:0000313|EMBL:CCX37165.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
Enterochelin esterase and related enzymes
L1_008_000M1_scaffold_201_25
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28997..29995
DNA (999bp) protein (333aa)
Transcriptional regulators n=1 Tax=Clostridium sp. CAG:1013 RepID=R5ACR0_9CLOT
Transcriptional regulators {ECO:0000313|EMBL:CCX37166.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
Transcriptional regulators
L1_008_000M1_scaffold_201_26
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30657..32009
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A7V7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37167.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
ABC transporter substrate-binding protein
L1_008_000M1_scaffold_201_27
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32191..33138
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A2U4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37168.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
binding-protein-dependent transport system inner membrane protein
L1_008_000M1_scaffold_201_28
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33162..34052
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A633_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37169.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
binding-protein-dependent transport system inner membrane protein
L1_008_000M1_scaffold_201_29
unknown

Not on your lists

34070..34297
DNA (228bp) protein (76aa)

This feature has no annotations

L1_008_000M1_scaffold_201_30
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34335..35114
DNA (780bp) protein (260aa)
Putative esterase n=1 Tax=Roseburia sp. CAG:471 RepID=R7EE04_9FIRM
Putative esterase {ECO:0000313|EMBL:CDD99707.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
putative esterase
Displaying items 1-30 of 69 in total

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