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L1_008_000M1_scaffold_214

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_214_1
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(80..217)
DNA (138bp) protein (46aa)
Predicted transcriptional regulators n=1 Tax=Coprococcus catus GD/7 RepID=D4J5R7_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBK79688.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L1_008_000M1_scaffold_214_2
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(426..734)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6F7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24108.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_214_3
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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904..1575
DNA (672bp) protein (224aa)
Regulatory protein VanR n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q993_9FIRM
Regulatory protein VanR {ECO:0000313|EMBL:CCZ25108.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
regulatory protein VanR
L1_008_000M1_scaffold_214_4
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1568..2548
DNA (981bp) protein (327aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QFM4_9FIRM
two-component sensor histidine kinase
L1_008_000M1_scaffold_214_5
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2632..3309
DNA (678bp) protein (226aa)
ABC transporter ATP-binding protein (EC:3.6.3.-)
Sulfate-transporting ATPase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8R6_9FIRM
Sulfate-transporting ATPase {ECO:0000313|EMBL:CCZ25110.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_214_6
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3299..5791
DNA (2493bp) protein (831aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QSC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25111.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_008_000M1_scaffold_214_7
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(5894..6457)
DNA (564bp) protein (188aa)
Maf-like protein BN550_00464 n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QVS6_9FIRM
Maf-like protein BN550_00464 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
maf; septum formation protein Maf
L1_008_000M1_scaffold_214_8
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6438..8579)
DNA (2142bp) protein (714aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Polyribonucleotide nucleotidyltransferase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q997_9FIRM
polynucleotide phosphorylase/polyadenylase
L1_008_000M1_scaffold_214_9
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8691..9944
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QFM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25114.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_214_10
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9993..10772
DNA (780bp) protein (260aa)
Zinc:iron permease n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8S1_9FIRM
Zinc:iron permease {ECO:0000313|EMBL:CCZ25115.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
zinc/iron permease
L1_008_000M1_scaffold_214_11
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10773..11399)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QSC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25116.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_008_000M1_scaffold_214_12
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11454..11804
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QVT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25117.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_214_13
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(11814..12299)
DNA (486bp) protein (162aa)
Transcription elongation factor GreA n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q9A1_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
greA; transcription elongation factor GreA
L1_008_000M1_scaffold_214_14
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12359..12820)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QFN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25119.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_008_000M1_scaffold_214_15
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(12824..13453)
DNA (630bp) protein (210aa)
Uridine kinase {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825};; Cytidine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; Uridine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
udk; Uridine kinase (EC:2.7.1.48)
Uridine kinase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8S4_9FIRM
L1_008_000M1_scaffold_214_16
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(13443..14696)
DNA (1254bp) protein (418aa)
Peptidase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QSD3_9FIRM
Peptidase {ECO:0000313|EMBL:CCZ25121.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
protease
L1_008_000M1_scaffold_214_17
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(14683..15615)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QVT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25122.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_008_000M1_scaffold_214_18
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15621..16211)
DNA (591bp) protein (197aa)
O-methyltransferase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q9A5_9FIRM
O-methyltransferase {ECO:0000313|EMBL:CCZ25123.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
yrrM; acyl-CoA O-methyltransferase
L1_008_000M1_scaffold_214_19
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(16213..17283)
DNA (1071bp) protein (357aa)
Aminodeoxychorismate lyase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QFN5_9FIRM
Aminodeoxychorismate lyase {ECO:0000313|EMBL:CCZ25124.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
yrrL; UPF0755-like protein
L1_008_000M1_scaffold_214_20
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17361..18464)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8S9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25125.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
3-carboxymuconate cyclase
L1_008_000M1_scaffold_214_21
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18548..18841)
DNA (294bp) protein (98aa)
UPF0473 protein BN550_00478 n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QSD7_9FIRM
UPF0473 protein BN550_00478 {ECO:0000256|HAMAP-Rule:MF_01448}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_008_000M1_scaffold_214_22
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18845..19264)
DNA (420bp) protein (140aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Putative Holliday junction resolvase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QVV4_9FIRM
putative Holliday junction resolvase
L1_008_000M1_scaffold_214_23
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19264..19518)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q9A8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25128.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_008_000M1_scaffold_214_24
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(19570..22176)
DNA (2607bp) protein (869aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QFN9_9FIRM
L1_008_000M1_scaffold_214_25
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22448..22558)
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8T1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25130.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_214_26
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(22598..24847)
DNA (2250bp) protein (750aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Helicase RecD/TraA family n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QSE1_9FIRM
helicase, RecD/TraA family
L1_008_000M1_scaffold_214_27
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24847..25980)
DNA (1134bp) protein (378aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QVW8_9FIRM
trmU; putative tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
L1_008_000M1_scaffold_214_28
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26072..26989)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q9B2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25133.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
glk.2; glucokinase
L1_008_000M1_scaffold_214_29
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27038..28036)
DNA (999bp) protein (333aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
rluC; ribosomal large subunit pseudouridine synthase C (EC:5.4.99.24)
Pseudouridine synthase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QFP3_9FIRM
L1_008_000M1_scaffold_214_30
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

28272..28805
DNA (534bp) protein (178aa)
Hydrolase NUDIX family n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8T6_9FIRM
Hydrolase NUDIX family {ECO:0000313|EMBL:CCZ25135.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
spore photoproduct lyase
Displaying items 1-30 of 79 in total

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