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L1_008_000M1_scaffold_217

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_217_1
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(266..592)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QPS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24206.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
anion symport for sucrose
L1_008_000M1_scaffold_217_2
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(736..1110)
DNA (375bp) protein (125aa)
Desulfoferrodoxin ferrous iron-binding domain n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GRU0_9FIRM
desulfoferrodoxin ferrous iron-binding domain
Desulfoferrodoxin ferrous iron-binding domain {ECO:0000313|EMBL:CBL40515.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_008_000M1_scaffold_217_3
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1194..1844)
DNA (651bp) protein (217aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Coprococcus catus GD/7 RepID=D4JB58_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBK81579.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L1_008_000M1_scaffold_217_4
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2253..2414
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q744_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24540.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_217_5
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2732..4537)
DNA (1806bp) protein (602aa)
ABC transporter, ATP-binding protein n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NRY4_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEF94038.1}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
macB; macrolide export ATP-binding/permease protein MacB
L1_008_000M1_scaffold_217_6
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4530..6602)
DNA (2073bp) protein (691aa)
ABC transporter, ATP-binding protein n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NRY3_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEF94037.1}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
ABC transporter ATPase
L1_008_000M1_scaffold_217_7
unknown

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comp(6799..7254)
DNA (456bp) protein (152aa)

This feature has no annotations

L1_008_000M1_scaffold_217_8
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7328..7663
DNA (336bp) protein (112aa)
Transcriptional regulator, PadR family n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NNT9_9FIRM
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EEF95114.1}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
Predicted transcriptional regulators
L1_008_000M1_scaffold_217_9
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7660..8037
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NNT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF95113.1}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
hypothetical protein
L1_008_000M1_scaffold_217_10
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8053..8490
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5U3W6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ63797.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L1_008_000M1_scaffold_217_11
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(8568..8912)
DNA (345bp) protein (115aa)
Putative TnpV n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q9K5_9FIRM
Putative TnpV {ECO:0000313|EMBL:CCZ25253.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_008_000M1_scaffold_217_12
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8909..10189)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VPG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY88427.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
Relaxase
L1_008_000M1_scaffold_217_13
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10182..10496)
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1AUU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC84667.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
Bacterial mobilisation protein (MobC)./Ribbon-helix-helix protein, copG family.
L1_008_000M1_scaffold_217_14
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10668..12392)
DNA (1725bp) protein (575aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1AUV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC84666.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L1_008_000M1_scaffold_217_15
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12361..12549)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KV88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS47412.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
HTH domain.
L1_008_000M1_scaffold_217_16
unknown

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comp(12552..12752)
DNA (201bp) protein (67aa)

This feature has no annotations

L1_008_000M1_scaffold_217_17
unknown

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12938..13639
DNA (702bp) protein (234aa)

This feature has no annotations

L1_008_000M1_scaffold_217_18
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13748..14800
DNA (1053bp) protein (351aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NHY2_CLOSV
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDS05730.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
phage integrase
L1_008_000M1_scaffold_217_19
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(14872..15102)
DNA (231bp) protein (77aa)
30S ribosomal protein S18 n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QFR9_9FIRM
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
SSU ribosomal protein S18P
L1_008_000M1_scaffold_217_20
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15120..15602)
DNA (483bp) protein (161aa)
Single-stranded DNA-binding protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q9E2_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
single-strand binding protein
L1_008_000M1_scaffold_217_21
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(15620..15901)
DNA (282bp) protein (94aa)
30S ribosomal protein S6 n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QW01_9FIRM
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
rpsF; 30S ribosomal protein S6
L1_008_000M1_scaffold_217_22
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16081..16425
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QSH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25171.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_217_23
unknown

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comp(16405..16755)
DNA (351bp) protein (117aa)

This feature has no annotations

L1_008_000M1_scaffold_217_24
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16752..17390)
DNA (639bp) protein (213aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4J3_9FIRM
L1_008_000M1_scaffold_217_25
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17496..18413
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=[Eubacterium] cylindroides ATCC 27803 RepID=U2QLB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK42088.1}; TaxID=649755 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides ATCC 27803.;"
dTDP-glucose pyrophosphorylase
L1_008_000M1_scaffold_217_26
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(18430..19500)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6CG47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA64232.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
L1_008_000M1_scaffold_217_27
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19584..19796)
DNA (213bp) protein (71aa)
Cof-like hydrolase n=3 Tax=Erysipelotrichaceae RepID=B0N1M0_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:CCZ36803.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Haloacid dehalogenase-like hydrolase
L1_008_000M1_scaffold_217_28
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(19825..20220)
DNA (396bp) protein (132aa)
Cof-like hydrolase n=2 Tax=Coprobacillus RepID=C3RIV0_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EDS19635.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
haloacid dehalogenase-like hydrolase
L1_008_000M1_scaffold_217_29
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20178..21023)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G8V6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW05549.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
HAD-superfamily hydrolase, subfamily IIB
L1_008_000M1_scaffold_217_30
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21366..21899)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AN78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45726.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
transcriptional regulator, RpiR family
Displaying items 1-30 of 78 in total

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