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L1_008_000M1_scaffold_226

Search features with annotation key words

Displaying items 31-60 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_226_31
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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31544..32233
DNA (690bp) protein (230aa)
Phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6T9X8_9FIRM
L1_008_000M1_scaffold_226_32
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32222..33889)
DNA (1668bp) protein (556aa)
Sulfate permease n=1 Tax=Clostridium sp. CAG:7 RepID=R5IEY9_9CLOT
Sulfate permease {ECO:0000313|EMBL:CCY40635.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Sulfate permease and related transporters (MFS superfamily)
L1_008_000M1_scaffold_226_33
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(34036..34710)
DNA (675bp) protein (225aa)
DNA-binding helix-turn-helix protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G897_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCY13388.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
helix-turn-helix domain-containing protein
L1_008_000M1_scaffold_226_34
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34913..35647
DNA (735bp) protein (245aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z8Y1_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75212.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_008_000M1_scaffold_226_35
Thermoanaerobacter siderophilus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35649..37127)
DNA (1479bp) protein (493aa)
Cell wall-associated hydrolase, invasion-associated protein n=2 Tax=Thermoanaerobacter RepID=I8R3S5_9THEO
Cell wall-associated hydrolase, invasion-associated protein {ECO:0000313|EMBL:EIW00050.1}; TaxID=880478 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter siderophilus SR4.;"
NLP/P60 protein
L1_008_000M1_scaffold_226_36
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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37459..37797
DNA (339bp) protein (113aa)
Predicted transcription factor, homolog of eukaryotic MBF1 n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LA01_RUMC1
Predicted transcription factor, homolog of eukaryotic MBF1
Predicted transcription factor, homolog of eukaryotic MBF1 {ECO:0000313|EMBL:CBL16446.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
L1_008_000M1_scaffold_226_37
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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37863..38204
DNA (342bp) protein (114aa)
DNA-binding helix-turn-helix protein id=4129768 bin=GWF2_Clostridiales_36_10 species=[Clostridium] difficile genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
Predicted transcription factor, homolog of eukaryotic MBF1
Tax=GWF2_Clostridiales_36_10_curated
L1_008_000M1_scaffold_226_38
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

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comp(38267..39100)
DNA (834bp) protein (278aa)
Formate transporter n=1 Tax=Firmicutes bacterium CAG:534 RepID=R7AW18_9FIRM
Formate transporter {ECO:0000313|EMBL:CDD45782.1}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
formate transporter
L1_008_000M1_scaffold_226_39
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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39291..40079
DNA (789bp) protein (263aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGA5_9FIRM
L1_008_000M1_scaffold_226_40
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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40100..41350
DNA (1251bp) protein (417aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IXX1_9FIRM
L1_008_000M1_scaffold_226_41
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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41437..42447
DNA (1011bp) protein (337aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
aspartate--ammonia ligase, AsnA-type (EC:6.3.1.1)
Aspartate--ammonia ligase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GW68_9FIRM
L1_008_000M1_scaffold_226_42
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42514..43965)
DNA (1452bp) protein (484aa)
Cation transport protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YC55_9FIRM
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR01421.1}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
Trk-type K+ transport systems, membrane components
L1_008_000M1_scaffold_226_43
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44002..45363)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9J8G1_9FIRM
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR01420.1}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
hypothetical protein
L1_008_000M1_scaffold_226_44
Monosiga brevicollis, Monosiga, Choanoflagellida, Eukaryota

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comp(45501..47741)
DNA (2241bp) protein (747aa)
Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V6E6_MONBE
Predicted protein {ECO:0000313|EMBL:EDQ86868.1}; TaxID=81824 species="Eukaryota; Choanoflagellida; Codonosigidae; Monosiga.;" source="Monosiga brevicollis (Choanoflagellate).;"
gamma-D-glutamate-meso-diaminopimelate muropeptidase
L1_008_000M1_scaffold_226_45
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47978..48706
DNA (729bp) protein (243aa)
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DXU6_9FIRM
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:CCX83749.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
short-chain dehydrogenase/reductase SDR
L1_008_000M1_scaffold_226_46
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(48707..50530)
DNA (1824bp) protein (608aa)
ABC transporter related n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D907_9FIRM
ABC transporter related {ECO:0000313|EMBL:CCX72341.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
ABC transporter
L1_008_000M1_scaffold_226_47
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(50590..52413)
DNA (1824bp) protein (608aa)
ABC transporter n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QYZ5_9FIRM
ABC transporter {ECO:0000313|EMBL:CCZ34195.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
multidrug ABC transporter ATPase and permease
L1_008_000M1_scaffold_226_48
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(52529..53839)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JTQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE67334.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
Hemolysins and related proteins containing CBS domains
L1_008_000M1_scaffold_226_49
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

54070..56874
DNA (2805bp) protein (935aa)
beta-glucosidase (EC:3.2.1.21)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000382C307
Beta-glucosidase {ECO:0000313|EMBL:EPZ42364.1}; TaxID=1356854 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidoterrestris ATCC 49025.;"
L1_008_000M1_scaffold_226_50
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(56950..58038)
DNA (1089bp) protein (363aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase n=1 Tax=Clostridium sp. CAG:91 RepID=R6VST0_9CLOT
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:CDD01713.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L1_008_000M1_scaffold_226_51
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(58215..60329)
DNA (2115bp) protein (705aa)
Sulfatase n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KR46_CLOPH
sulfatase
Sulfatase {ECO:0000313|EMBL:ABX40514.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L1_008_000M1_scaffold_226_52
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(60413..63103)
DNA (2691bp) protein (897aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000372E307
Small GTP-binding protein {ECO:0000313|EMBL:EES76729.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
small GTP-binding protein domain
L1_008_000M1_scaffold_226_53
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(63123..64370)
DNA (1248bp) protein (416aa)
GTPase HflX n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W6Q5_9CLOT
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
GTP-binding proten HflX
L1_008_000M1_scaffold_226_54
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(64367..65728)
DNA (1362bp) protein (454aa)
MATE efflux family protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B4D9_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:ERI66653.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
MATE efflux family protein
L1_008_000M1_scaffold_226_55
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(65750..67762)
DNA (2013bp) protein (671aa)
Beta-galactosidase trimerization domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CFA8_9CLOT
Beta-galactosidase trimerization domain protein {ECO:0000313|EMBL:ERI66046.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
beta-galactosidase
L1_008_000M1_scaffold_226_56
Clostridium sp. CAG:230, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(67790..68623)
DNA (834bp) protein (278aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=1262782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:230.;"
Endonuclease IV (EC:3.1.21.2 3.1.21.-)
Probable endonuclease 4 n=1 Tax=Clostridium sp. CAG:230 RepID=R6DCU7_9CLOT
L1_008_000M1_scaffold_226_57
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(68638..70122)
DNA (1485bp) protein (495aa)
Putative mutarotase n=1 Tax=Clostridium sp. CAG:590 RepID=R5EDB7_9CLOT
Putative mutarotase {ECO:0000313|EMBL:CCX89279.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
Galactose mutarotase and related enzymes
L1_008_000M1_scaffold_226_58
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(70122..71285)
DNA (1164bp) protein (388aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Blautia sp. CAG:37 RepID=R7JW65_9FIRM
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:CDE67843.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase
L1_008_000M1_scaffold_226_59
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

comp(71287..72597)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BDN6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD63865.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
poly-gamma-glutamate synthesis protein
L1_008_000M1_scaffold_226_60
unknown

Not on your lists

comp(72898..73515)
DNA (618bp) protein (206aa)

This feature has no annotations

Displaying items 31-60 of 66 in total

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