ggKbase home page

L1_008_000M1_scaffold_226

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_226_1
unknown

Not on your lists

comp(1..144)
DNA (144bp) protein (48aa)

This feature has no annotations

L1_008_000M1_scaffold_226_2
unknown

Not on your lists

comp(316..606)
DNA (291bp) protein (97aa)

This feature has no annotations

L1_008_000M1_scaffold_226_3
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(715..1356)
DNA (642bp) protein (214aa)
ABC transporter ATPase component (EC:3.6.3.-)
ABC-type multidrug transport system ATPase component n=1 Tax=Clostridium sp. CAG:122 RepID=R5RIH8_9CLOT
ABC-type multidrug transport system ATPase component {ECO:0000313|EMBL:CCZ40363.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
L1_008_000M1_scaffold_226_4
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1420..2307)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NFN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10957.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L1_008_000M1_scaffold_226_5
unknown

Not on your lists

comp(2294..3439)
DNA (1146bp) protein (382aa)

This feature has no annotations

L1_008_000M1_scaffold_226_6
unknown

Not on your lists

comp(3498..4316)
DNA (819bp) protein (273aa)

This feature has no annotations

L1_008_000M1_scaffold_226_7
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4811..5143)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Blautia hydrogenotrophica CAG:147 RepID=R5BZI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX58022.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
Predicted transcriptional regulators
L1_008_000M1_scaffold_226_8
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5277..6212
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2ABR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ23520.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
Fe-S oxidoreductase
L1_008_000M1_scaffold_226_9
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6430..6993)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000379F0D1
Uncharacterized protein {ECO:0000313|EMBL:EHO83863.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
hypothetical protein
L1_008_000M1_scaffold_226_10
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7054..7962)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9K078_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS36892.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
helix-turn-helix type 11 domain-containing protein
L1_008_000M1_scaffold_226_11
unknown

Not on your lists

comp(8079..8561)
DNA (483bp) protein (161aa)

This feature has no annotations

L1_008_000M1_scaffold_226_12
unknown

Not on your lists

comp(8748..8957)
DNA (210bp) protein (70aa)

This feature has no annotations

L1_008_000M1_scaffold_226_13
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9600..11051
DNA (1452bp) protein (484aa)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9IJG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS22080.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
L1_008_000M1_scaffold_226_14
unknown

Not on your lists

comp(11170..11406)
DNA (237bp) protein (79aa)

This feature has no annotations

L1_008_000M1_scaffold_226_15
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11511..11990)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZE25_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD39201.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Protein of unknown function (DUF1700).
L1_008_000M1_scaffold_226_16
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12012..13859)
DNA (1848bp) protein (616aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:52 RepID=R6G5H5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB20773.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
hypothetical protein
L1_008_000M1_scaffold_226_17
Bacteroides pectinophilus CAG:437, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13864..15099)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Bacteroides pectinophilus CAG:437 RepID=R7B2C6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD57992.1}; TaxID=1263051 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides pectinophilus CAG:437.;"
polysaccharide biosynthesis protein
L1_008_000M1_scaffold_226_18
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15096..15980)
DNA (885bp) protein (295aa)
LICD family protein n=2 Tax=Clostridium RepID=D3AC29_9CLOT
LICD family protein {ECO:0000313|EMBL:EFD00614.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
LicD family protein
L1_008_000M1_scaffold_226_19
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15993..17000)
DNA (1008bp) protein (336aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IB96_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61203.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
family 2 glycosyl transferase
L1_008_000M1_scaffold_226_20
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17026..18087)
DNA (1062bp) protein (354aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R4L8_CLOSW
Isopropanol dehydrogenase {ECO:0000313|EMBL:KEZ91595.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
alcohol dehydrogenase
L1_008_000M1_scaffold_226_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18129..19304)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J6N2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44522.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
C-methyltransferase
L1_008_000M1_scaffold_226_22
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19449..20396)
DNA (948bp) protein (316aa)
dTDP-6-deoxy-L-talose 4-dehydrogenase (NAD(+)) {ECO:0000313|EMBL:KJJ66073.1}; EC=1.1.1.339 {ECO:0000313|EMBL:KJJ66073.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HRQ9_9CLOT
Nucleoside-diphosphate-sugar epimerases
L1_008_000M1_scaffold_226_23
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20398..22248)
DNA (1851bp) protein (617aa)
Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] (EC:2.2.1.6)
Acetolactate synthase I/II/III large subunit n=9 Tax=Clostridium RepID=N9VU88_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF26583.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
L1_008_000M1_scaffold_226_24
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22252..23589)
DNA (1338bp) protein (446aa)
Lipopolysaccharide biosynthesis protein RfbH n=1 Tax=Clostridium sp. CAG:632 RepID=R5KE29_9CLOT
Lipopolysaccharide biosynthesis protein RfbH {ECO:0000313|EMBL:CCY59202.1}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
L1_008_000M1_scaffold_226_25
Bacteroides pectinophilus CAG:437, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23593..24696)
DNA (1104bp) protein (368aa)
CDP-glucose 4,6-dehydratase (EC:4.2.1.45)
CDP-glucose 4,6-dehydratase n=1 Tax=Butyrivibrio sp. XPD2006 RepID=UPI0003B74387
Uncharacterized protein {ECO:0000313|EMBL:CDD57975.1}; TaxID=1263051 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides pectinophilus CAG:437.;"
L1_008_000M1_scaffold_226_26
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24700..25476)
DNA (777bp) protein (259aa)
glucose-1-phosphate cytidylyltransferase (EC:2.7.7.33)
Glucose-1-phosphate cytidylyltransferase n=1 Tax=Clostridium sp. CAG:58 RepID=R6RXS9_9CLOT
Glucose-1-phosphate cytidylyltransferase {ECO:0000313|EMBL:CDC50159.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
L1_008_000M1_scaffold_226_27
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25655..27202)
DNA (1548bp) protein (516aa)
Uncharacterized protein n=2 Tax=root RepID=R6XCX2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE35707.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
ATPase components of ABC transporters with duplicated ATPase domains
L1_008_000M1_scaffold_226_28
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27254..29686)
DNA (2433bp) protein (811aa)
Vitamin B12-dependent methionine synthase family protein n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6QGG3_9FIRM
Vitamin B12-dependent methionine synthase family protein {ECO:0000313|EMBL:CDC35718.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
homocysteine S-methyltransferase
L1_008_000M1_scaffold_226_29
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

Not on your lists

comp(29753..30412)
DNA (660bp) protein (220aa)
Vitamin B12 dependent methionine synthase, activation domain. (EC:2.1.1.13)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N730_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF07877.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
L1_008_000M1_scaffold_226_30
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30409..31275)
DNA (867bp) protein (289aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
5,10-methylenetetrahydrofolate reductase, prokaryotic form (EC:1.5.1.20)
Methylenetetrahydrofolate reductase n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6QY02_9FIRM
Displaying items 1-30 of 66 in total

View Taxonomy