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L1_008_000M1_scaffold_228

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Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_228_1
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(235..2325)
DNA (2091bp) protein (697aa)
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Polyribonucleotide nucleotidyltransferase n=5 Tax=Clostridiales RepID=D4MYT6_9FIRM
L1_008_000M1_scaffold_228_2
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2580..2846)
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=5 Tax=Clostridiales RepID=D4MYT7_9FIRM
SSU ribosomal protein S15P
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_008_000M1_scaffold_228_3
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2975..3787)
DNA (813bp) protein (271aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Pyrroline-5-carboxylate reductase n=5 Tax=Clostridiales RepID=D4MYT8_9FIRM
L1_008_000M1_scaffold_228_4
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3812..4756)
DNA (945bp) protein (315aa)
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.- 5.4.99.12)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Pseudouridine synthase n=4 Tax=Clostridiales RepID=D4MYT9_9FIRM
L1_008_000M1_scaffold_228_5
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4707..5222)
DNA (516bp) protein (172aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase n=2 Tax=Lachnospiraceae RepID=E5VL89_9FIRM
L1_008_000M1_scaffold_228_6
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5240..6319)
DNA (1080bp) protein (360aa)
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
3-dehydroquinate synthase n=3 Tax=Clostridiales RepID=D4MYU1_9FIRM
L1_008_000M1_scaffold_228_7
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6309..6899)
DNA (591bp) protein (197aa)
DivIVA domain n=4 Tax=Clostridiales RepID=D4MYU2_9FIRM
DivIVA domain
DivIVA domain-containing protein {ECO:0000313|EMBL:CDA31395.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_228_8
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6909..7664)
DNA (756bp) protein (252aa)
S4 domain protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q9Y5_9FIRM
S4 domain protein {ECO:0000313|EMBL:EKY24741.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Uncharacterized conserved protein, contains S4-like domain
L1_008_000M1_scaffold_228_9
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7671..8231)
DNA (561bp) protein (187aa)
Cell division protein SepF n=2 Tax=Lachnospiraceae RepID=L1QAU6_9FIRM
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
hypothetical protein
L1_008_000M1_scaffold_228_10
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8245..8940)
DNA (696bp) protein (232aa)
Pyridoxal phosphate enzyme, YggS family n=5 Tax=Clostridiales RepID=D4MYU5_9FIRM
pyridoxal phosphate enzyme, YggS family
Alanine racemase domain-containing protein {ECO:0000313|EMBL:CDA31392.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_228_11
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8983..10362)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5ZB99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA31391.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
hypothetical protein
L1_008_000M1_scaffold_228_12
unknown

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comp(10366..11307)
DNA (942bp) protein (314aa)
Radical SAM protein, TIGR01212 family n=3 Tax=Clostridiales RepID=D4MYU7_9FIRM
radical SAM protein, TIGR01212 family
Radical SAM protein, TIGR01212 family {ECO:0000313|EMBL:CBL37792.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_228_13
unknown

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comp(11309..12253)
DNA (945bp) protein (315aa)
D-alanyl-D-alanine carboxypeptidase n=3 Tax=Clostridiales RepID=D4MYU8_9FIRM
D-alanyl-D-alanine carboxypeptidase
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CBL37793.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_228_14
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12316..12708)
DNA (393bp) protein (131aa)
Methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7BW35_9FIRM
Putative methylglyoxal synthase {ECO:0000313|EMBL:EKY24747.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_008_000M1_scaffold_228_15
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12721..13836)
DNA (1116bp) protein (372aa)
Cell cycle protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5ZR20_9FIRM
Cell cycle protein {ECO:0000313|EMBL:CDA31387.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Bacterial cell division membrane protein
L1_008_000M1_scaffold_228_16
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13852..14112)
DNA (261bp) protein (87aa)
Cell division topological specificity factor n=4 Tax=Clostridiales RepID=D4MYV2_9FIRM
cell division topological specificity factor MinE
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_228_17
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14127..14927)
DNA (801bp) protein (267aa)
Site-determining protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VL35_9FIRM
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
septum site-determining protein MinD
L1_008_000M1_scaffold_228_18
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14931..15671)
DNA (741bp) protein (247aa)
Probable septum site-determining protein MinC n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q9Z3_9FIRM
septum site-determining protein MinC
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_228_19
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15692..18604)
DNA (2913bp) protein (971aa)
Penicillin-binding protein transpeptidase domain protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5YVA6_9FIRM
Penicillin-binding protein transpeptidase domain protein {ECO:0000313|EMBL:CDA31383.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
hypothetical protein
L1_008_000M1_scaffold_228_20
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18604..19119)
DNA (516bp) protein (172aa)
Rod shape-determining protein MreD n=3 Tax=Clostridiales RepID=B0NWM7_9CLOT
Rod shape-determining protein MreD {ECO:0000313|EMBL:CDA31382.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
rod shape-determining protein MreD
L1_008_000M1_scaffold_228_21
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19131..20015)
DNA (885bp) protein (295aa)
Cell shape-determining protein MreC n=4 Tax=Clostridiales RepID=D4MYV6_9FIRM
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
rod shape-determining protein MreC
L1_008_000M1_scaffold_228_22
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20019..20978)
DNA (960bp) protein (320aa)
Actin-like ATPase involved in cell morphogenesis n=3 Tax=Clostridiales RepID=D4MYV7_9FIRM
Actin-like ATPase involved in cell morphogenesis
Putative rod shape-determining protein MreB {ECO:0000313|EMBL:EKY24755.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_008_000M1_scaffold_228_23
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20989..21750)
DNA (762bp) protein (254aa)
DNA replication and repair protein RadC n=2 Tax=Clostridiales RepID=D4MYV8_9FIRM
Putative DNA repair protein RadC {ECO:0000313|EMBL:EKY24756.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
DNA replication and repair protein RadC
L1_008_000M1_scaffold_228_24
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21812..23107)
DNA (1296bp) protein (432aa)
Cystathionine beta-lyase family protein involved in aluminum resistance n=5 Tax=Clostridiales RepID=D4MYV9_9FIRM
Cystathionine beta-lyase family protein involved in aluminum resistance
Aluminum resistance protein {ECO:0000313|EMBL:EKY24757.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_008_000M1_scaffold_228_25
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23082..24044)
DNA (963bp) protein (321aa)
tRNA isopentenyltransferase (miaA) (EC:2.5.1.75)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
tRNA dimethylallyltransferase n=2 Tax=Clostridiales RepID=D4MYW0_9FIRM
L1_008_000M1_scaffold_228_26
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24049..24426)
DNA (378bp) protein (126aa)
cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VL46_9FIRM
Cytidine deaminase {ECO:0000313|EMBL:EFV16372.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L1_008_000M1_scaffold_228_27
unknown

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comp(24452..26389)
DNA (1938bp) protein (646aa)
DNA mismatch repair protein MutL n=1 Tax=butyrate-producing bacterium SSC/2 RepID=D4MYW2_9FIRM
DNA mismatch repair protein MutL
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_228_28
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26394..29021)
DNA (2628bp) protein (876aa)
DNA mismatch repair protein MutS n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5Z3T1_9FIRM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
DNA mismatch repair protein MutS
L1_008_000M1_scaffold_228_29
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29014..30426)
DNA (1413bp) protein (471aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=3 Tax=Clostridiales RepID=D4MYW4_9FIRM
tRNA-i(6)A37 thiotransferase enzyme MiaB
L1_008_000M1_scaffold_228_30
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30716..32398
DNA (1683bp) protein (561aa)
Na/Pi-cotransporter II-like protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5ZR03_9FIRM
Na/Pi-cotransporter II-like protein {ECO:0000313|EMBL:CDA31372.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Na/Pi-cotransporter
Displaying items 1-30 of 63 in total

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