ggKbase home page

L1_008_000M1_scaffold_229

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_229_1
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15..524)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JMR5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE64883.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L1_008_000M1_scaffold_229_2
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(528..2255)
DNA (1728bp) protein (576aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI000381EE2C
Uncharacterized protein {ECO:0000313|EMBL:CDD25464.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_008_000M1_scaffold_229_3
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2292..3554)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MSK9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS04729.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
unusual protein kinase
L1_008_000M1_scaffold_229_4
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3590..4129)
DNA (540bp) protein (180aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Peptidyl-prolyl cis-trans isomerase n=4 Tax=root RepID=B0MSL0_9BACT
FKBP-type peptidyl-prolyl cis-trans isomerase
L1_008_000M1_scaffold_229_5
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4377..7208)
DNA (2832bp) protein (944aa)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
glycine dehydrogenase n=1 Tax=Alistipes sp. JC136 RepID=UPI000288D34A
glycine dehydrogenase, decarboxylating
L1_008_000M1_scaffold_229_6
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7253..8926)
DNA (1674bp) protein (558aa)
Uridine kinase (EC:2.7.1.48)
Phosphoribulokinase/uridine kinase family protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JMI9_9BACT
Phosphoribulokinase/uridine kinase family protein {ECO:0000313|EMBL:CDE64876.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L1_008_000M1_scaffold_229_7
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8996..10417
DNA (1422bp) protein (474aa)
5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases (EC:3.1.3.5)
Ser/Thr protein phosphatase n=1 Tax=Alistipes onderdonkii RepID=UPI00035FFEA8
5'-nucleotidase/2' 3'-cyclic phosphodiesterase-like hydrolase {ECO:0000313|EMBL:CDD25459.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L1_008_000M1_scaffold_229_8
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


10630..12447
DNA (1818bp) protein (606aa)
30S ribosomal protein S1 n=3 Tax=Alistipes RepID=I3YKG4_ALIFI
Ribosomal protein S1 {ECO:0000313|EMBL:AFL77482.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
30S ribosomal protein S1
L1_008_000M1_scaffold_229_9
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12788..15028
DNA (2241bp) protein (747aa)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EDS02763.1}; EC=3.6.1.- {ECO:0000313|EMBL:EDS02763.1};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MYS7_9BACT
L1_008_000M1_scaffold_229_10
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15055..15864
DNA (810bp) protein (270aa)
Uncharacterized protein n=5 Tax=root RepID=B0MYS5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE64652.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Protein of unknown function (DUF3108).
L1_008_000M1_scaffold_229_11
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15898..16827
DNA (930bp) protein (310aa)
Uncharacterized protein n=4 Tax=root RepID=B0MYS4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS02760.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L1_008_000M1_scaffold_229_12
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16952..17962)
DNA (1011bp) protein (337aa)
Transcriptional regulator/sugar kinase n=2 Tax=Alistipes RepID=I3YKU8_ALIFI
transcriptional regulator/sugar kinase
Transcriptional regulator/sugar kinase {ECO:0000313|EMBL:AFL77616.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L1_008_000M1_scaffold_229_13
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18073..19044
DNA (972bp) protein (324aa)
Geranylgeranyl pyrophosphate synthase (EC:2.5.1.10)
Geranylgeranyl pyrophosphate synthase n=2 Tax=Alistipes RepID=D4IKZ9_9BACT
Geranylgeranyl pyrophosphate synthase {ECO:0000313|EMBL:CCZ96218.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L1_008_000M1_scaffold_229_14
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19047..19868
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI00031D59C6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFR36061.1}; TaxID=1228997 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer RA-CH-1.;"
L1_008_000M1_scaffold_229_15
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19900..21198
DNA (1299bp) protein (433aa)
collagenase. Unknown type peptidase. MEROPS family U32 (EC:3.4.-.-)
collagenase n=1 Tax=Alistipes senegalensis RepID=UPI000368F42F
Uncharacterized protein {ECO:0000313|EMBL:CBK63612.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L1_008_000M1_scaffold_229_16
unknown

Not on your lists

21195..21380
DNA (186bp) protein (62aa)

This feature has no annotations

L1_008_000M1_scaffold_229_17
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21719..23116
DNA (1398bp) protein (466aa)
Xaa-Pro aminopeptidase (EC:3.4.11.9)
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:CBK63617.1}; EC=3.4.11.9 {ECO:0000313|EMBL:CBK63617.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Xaa-Pro aminopeptidase n=1 Tax=Alistipes senegalensis RepID=UPI00031816D6
L1_008_000M1_scaffold_229_18
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23123..23650
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MYP3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS02729.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Phosphorylase superfamily
L1_008_000M1_scaffold_229_19
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23647..24426
DNA (780bp) protein (260aa)
1,4-dihydroxy-6-naphtoate synthase {ECO:0000256|HAMAP-Rule:MF_00996}; EC=4.1.-.- {ECO:0000256|HAMAP-Rule:MF_00996};; Menaquinone biosynthetic enzyme MqnD {ECO:0000256|HAMAP-Rule:MF_00996}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
1,4-dihydroxy-6-naphthoate synthase n=1 Tax=Alistipes onderdonkii RepID=UPI00035C9FE1
periplasmic solute-binding protein
L1_008_000M1_scaffold_229_20
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24546..27143)
DNA (2598bp) protein (866aa)
molecular chaperone ClpB n=1 Tax=Alistipes onderdonkii RepID=UPI0003806F8C
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
ATP-dependent chaperone ClpB
L1_008_000M1_scaffold_229_21
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27404..28549
DNA (1146bp) protein (382aa)
DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:EDS02833.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EDS02833.1};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
DNA polymerase III, subunit gamma and tau n=3 Tax=root RepID=B0MYZ7_9BACT
DNA polymerase III subunits gamma and tau
L1_008_000M1_scaffold_229_22
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29241..29669
DNA (429bp) protein (143aa)
DNA polymerase III subunit gamma and tau n=1 Tax=Alistipes sp. CAG:29 RepID=R6XPD3_9BACT
DNA polymerase III subunit gamma and tau {ECO:0000313|EMBL:CDD25508.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
DNA polymerase III subunits gamma and tau
L1_008_000M1_scaffold_229_23
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29693..30985
DNA (1293bp) protein (431aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
Tyrosine--tRNA ligase n=1 Tax=Alistipes sp. CAG:268 RepID=R6VQY7_9BACT
L1_008_000M1_scaffold_229_24
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31119..31472
DNA (354bp) protein (118aa)
diguanylate cyclase n=1 Tax=Alistipes onderdonkii RepID=UPI000368DC2F
dihydroneopterin aldolase
Dihydroneopterin aldolase {ECO:0000313|EMBL:AFL77508.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L1_008_000M1_scaffold_229_25
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31806..33167
DNA (1362bp) protein (454aa)
Na+-dependent transporter n=1 Tax=Alistipes senegalensis RepID=UPI0002ED7218
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Na+-dependent transporters of the SNF family
L1_008_000M1_scaffold_229_26
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33432..34202)
DNA (771bp) protein (257aa)
Fe-S oxidoreductase n=2 Tax=Alistipes RepID=I3YKQ7_ALIFI
Fe-S oxidoreductase
Fe-S oxidoreductase {ECO:0000313|EMBL:AFL77575.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L1_008_000M1_scaffold_229_27
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34283..35470
DNA (1188bp) protein (396aa)
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MB93_9BACT
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein {ECO:0000313|EMBL:EFR57798.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Na+/H+ dicarboxylate symporter
L1_008_000M1_scaffold_229_28
Bacteroides faecis CAG:32, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35562..37970)
DNA (2409bp) protein (803aa)
cell wall binding repeat 2-containing protein n=1 Tax=Bacteroides faecis RepID=UPI000262E56E
FMN-binding domain protein {ECO:0000313|EMBL:CDC87884.1}; TaxID=1263044 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides faecis CAG:32.;"
hypothetical protein
L1_008_000M1_scaffold_229_29
unknown

Not on your lists

comp(38256..38399)
DNA (144bp) protein (48aa)

This feature has no annotations

L1_008_000M1_scaffold_229_30
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38549..40153
DNA (1605bp) protein (535aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
phosphoenolpyruvate carboxykinase (ATP) (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Alistipes sp. CAG:268 RepID=R6VQZ2_9BACT
Displaying items 1-30 of 81 in total

View Taxonomy