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L1_008_000M1_scaffold_250

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_250_1
unknown

Not on your lists

414..2243
DNA (1830bp) protein (610aa)

This feature has no annotations

L1_008_000M1_scaffold_250_2
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2463..2834
DNA (372bp) protein (124aa)
Predicted transcriptional regulator n=3 Tax=root RepID=D7GTT4_9FIRM
Predicted transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:CBL41226.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_008_000M1_scaffold_250_3
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2831..4618
DNA (1788bp) protein (596aa)
Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component n=2 Tax=root RepID=D4MHN1_9FIRM
Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component
Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component {ECO:0000313|EMBL:CBL33264.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L1_008_000M1_scaffold_250_4
unknown

Not on your lists

4696..4836
DNA (141bp) protein (47aa)

This feature has no annotations

L1_008_000M1_scaffold_250_5
unknown

Not on your lists

5279..6031
DNA (753bp) protein (251aa)

This feature has no annotations

L1_008_000M1_scaffold_250_6
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(6116..7444)
DNA (1329bp) protein (443aa)
MATE efflux family protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6M2I7_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDB88596.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
Na+-driven multidrug efflux pump
L1_008_000M1_scaffold_250_7
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7469..7921)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M0P3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS64236.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
marR; MarR family transcriptional regulator
L1_008_000M1_scaffold_250_8
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8193..9065
DNA (873bp) protein (291aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Blautia sp. CAG:37 RepID=R7JTL9_9FIRM
L1_008_000M1_scaffold_250_9
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9179..10321)
DNA (1143bp) protein (381aa)
glycerate kinase (EC:2.7.1.31)
Glycerate kinase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H820_9FIRM
Glycerate kinase {ECO:0000313|EMBL:CDE35799.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L1_008_000M1_scaffold_250_10
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10518..11411
DNA (894bp) protein (298aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Blautia sp. CAG:237 RepID=R6KSA0_9FIRM
FKBP-type peptidyl-prolyl cis-trans isomerases 2
L1_008_000M1_scaffold_250_11
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11523..12083
DNA (561bp) protein (187aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LWW8_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EOS62811.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
ECF subfamily RNA polymerase sigma-70 factor
L1_008_000M1_scaffold_250_12
unknown

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12080..12676
DNA (597bp) protein (199aa)

This feature has no annotations

L1_008_000M1_scaffold_250_13
Paenibacillus sp. TCA20, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12821..14230
DNA (1410bp) protein (470aa)
Proteinase inhibitor I4 serpin n=1 Tax=Calothrix sp. PCC 6303 RepID=K9UW83_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:GAK40140.1}; TaxID=1499968 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. TCA20.;"
proteinase inhibitor I4 serpin
L1_008_000M1_scaffold_250_14
Treponema brennaborense, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(14292..15161)
DNA (870bp) protein (290aa)
Transcriptional regulator with cupin sensor, AraC family n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LLA5_TREBD
AraC family transcriptional regulator
Transcriptional regulator with cupin sensor, AraC family {ECO:0000313|EMBL:AEE15583.1}; TaxID=906968 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3).;"
L1_008_000M1_scaffold_250_15
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

Not on your lists

15448..16155
DNA (708bp) protein (236aa)
L-fuculose-phosphate aldolase (EC:4.1.2.17)
L-fuculose-phosphate aldolase n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BII0_9FIRM
L-fuculose-phosphate aldolase {ECO:0000313|EMBL:CDD64928.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
L1_008_000M1_scaffold_250_16
Treponema brennaborense, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

16237..18018
DNA (1782bp) protein (594aa)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040955};; 6-deoxy-L-galactose isomerase {ECO:0000256|HAMAP-Rule:MF_01254}; TaxID=906968 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3).;"
L-fucose isomerase (EC:5.3.1.25)
L-fucose isomerase n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LLA2_TREBD
L1_008_000M1_scaffold_250_17
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18127..19707
DNA (1581bp) protein (527aa)
Glutaredoxin 2 n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KJE3_CLOPH
glutaredoxin
Glutaredoxin 2 {ECO:0000313|EMBL:ABX42555.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L1_008_000M1_scaffold_250_18
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19759..20055)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CMJ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI70462.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L1_008_000M1_scaffold_250_19
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20388..22040
DNA (1653bp) protein (551aa)
Extracellular solute-binding protein family 1 n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KJY7_CLOPH
extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ABX42559.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L1_008_000M1_scaffold_250_20
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22198..23124
DNA (927bp) protein (309aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KJY6_CLOPH
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABX42558.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L1_008_000M1_scaffold_250_21
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23140..24069
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CX99_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI71911.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
binding-protein-dependent transport systems inner membrane component
L1_008_000M1_scaffold_250_22
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24194..25501
DNA (1308bp) protein (436aa)
alpha-L-fucosidase (EC:3.2.1.51)
Alpha-L-fucosidase {ECO:0000313|EMBL:ABX42556.1}; EC=3.2.1.51 {ECO:0000313|EMBL:ABX42556.1};; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
Alpha-L-fucosidase n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KJE4_CLOPH
L1_008_000M1_scaffold_250_23
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25534..28116
DNA (2583bp) protein (861aa)
Transglutaminase-like protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0WPK4_9CLOT
Transglutaminase-like protein {ECO:0000313|EMBL:EJF38361.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
Transglutaminase-like superfamily.
L1_008_000M1_scaffold_250_24
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

Not on your lists

28246..29601
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:534 RepID=R7AXH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD48382.1}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
arsenical pump membrane protein
L1_008_000M1_scaffold_250_25
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29682..30284
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P556_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ04192.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
cytidylate kinase
L1_008_000M1_scaffold_250_26
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30640..31977
DNA (1338bp) protein (446aa)
phosphohydrolase n=1 Tax=Butyrivibrio sp. XPD2006 RepID=UPI0003B56CB5
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ADU20783.1}; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
L1_008_000M1_scaffold_250_27
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31970..32899)
DNA (930bp) protein (310aa)
Pectinesterase n=1 Tax=Roseburia sp. CAG:100 RepID=R7R318_9FIRM
Pectinesterase {ECO:0000313|EMBL:CDF44241.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
pectinesterase
L1_008_000M1_scaffold_250_28
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

33106..36654
DNA (3549bp) protein (1183aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BGF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD64612.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
hypothetical protein
L1_008_000M1_scaffold_250_29
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(36724..37128)
DNA (405bp) protein (135aa)
Rrf2 family protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRF7_9FIRM
Rrf2 family protein {ECO:0000313|EMBL:EHL72507.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
transcriptional regulator, BadM/Rrf2 family
L1_008_000M1_scaffold_250_30
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37370..38872
DNA (1503bp) protein (501aa)
Bacterial extracellular solute-binding protein family 5 n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AFP7_9CLOT
Bacterial extracellular solute-binding protein family 5 {ECO:0000313|EMBL:CCX38176.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
family 5 extracellular solute-binding protein
Displaying items 1-30 of 56 in total

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