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L1_008_000M1_scaffold_254

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_254_1
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2..259
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQ51_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24331.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_254_2
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(290..1438)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8K4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25030.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_008_000M1_scaffold_254_3
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1563..3242
DNA (1680bp) protein (560aa)
Glycosyltransferase group 4 family n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QFF9_9FIRM
Glycosyltransferase group 4 family {ECO:0000313|EMBL:CCZ25029.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
tarO; putative glycosyl transferase
L1_008_000M1_scaffold_254_4
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3331..3561
DNA (231bp) protein (77aa)
Preprotein translocase SecG subunit n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q936_9FIRM
Preprotein translocase SecG subunit {ECO:0000313|EMBL:CCZ25028.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_008_000M1_scaffold_254_5
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3608..5788
DNA (2181bp) protein (727aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Ribonuclease R n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QVJ8_9FIRM
rnr; exoribonuclease R
L1_008_000M1_scaffold_254_6
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5806..6252
DNA (447bp) protein (149aa)
SsrA-binding protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QS60_9FIRM
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
SsrA-binding protein
L1_008_000M1_scaffold_254_7
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6801..6950
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8U2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24968.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_254_8
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7119..8036
DNA (918bp) protein (306aa)
ABC transporter related n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MFQ0_ALKOO
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ABW17689.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
L1_008_000M1_scaffold_254_9
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8029..8805
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Clostridium tyrobutyricum RepID=UPI0002D6D95E
Uncharacterized protein {ECO:0000313|EMBL:EEG75145.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
L1_008_000M1_scaffold_254_10
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8877..9242
DNA (366bp) protein (122aa)
ABC transporter related protein n=1 Tax=Clostridium sp. CAG:389 RepID=R7LSC7_9CLOT
ABC transporter related protein {ECO:0000313|EMBL:CDE90986.1}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:389.;"
mdlB; Multi Drug ABC transporter transmembrane subunit family protein
L1_008_000M1_scaffold_254_11
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9324..10007
DNA (684bp) protein (228aa)
Putative regulatory protein VanR n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PN05_9CLOT
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:EET89338.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
two component transcriptional regulator, winged helix family
L1_008_000M1_scaffold_254_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10001..10915
DNA (915bp) protein (305aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=445337 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C str. Eklund.;"
Sensory transduction histidine kinase n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B7C9_CLOBO
histidine kinase
L1_008_000M1_scaffold_254_13
unknown

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10981..11094
DNA (114bp) protein (38aa)

This feature has no annotations

L1_008_000M1_scaffold_254_14
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11155..11817
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QFF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25024.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_254_15
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12145..15774
DNA (3630bp) protein (1210aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q931_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25023.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Cna protein B-type domain.
L1_008_000M1_scaffold_254_16
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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15931..16869
DNA (939bp) protein (313aa)
D12 class N6 adenine-specific DNA methyltransferase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QVJ3_9FIRM
D12 class N6 adenine-specific DNA methyltransferase {ECO:0000313|EMBL:CCZ25022.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
site-specific DNA methylase
L1_008_000M1_scaffold_254_17
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16853..17266
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QS55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25021.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_254_18
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17281..17625
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8J5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25020.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_008_000M1_scaffold_254_19
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17637..18488
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QFF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25019.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_008_000M1_scaffold_254_20
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18544..18936
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q926_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25018.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_254_21
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18938..19252
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QVI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25017.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_008_000M1_scaffold_254_22
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19240..19875
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QS52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25016.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_008_000M1_scaffold_254_23
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19841..21712
DNA (1872bp) protein (624aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8I7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25015.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Domain of unknown function DUF87.
L1_008_000M1_scaffold_254_24
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21727..22716
DNA (990bp) protein (330aa)
amidoligase (EC:6.3.-.-)
Virulence associated protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QFE6_9FIRM
Virulence associated protein {ECO:0000313|EMBL:CCZ25014.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_254_25
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22734..23225
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q922_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25013.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
AIG2-like family.
L1_008_000M1_scaffold_254_26
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23225..24298
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QVI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25012.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L1_008_000M1_scaffold_254_27
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24301..24708
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QS47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25011.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_254_28
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24722..25330
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8I3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25010.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_008_000M1_scaffold_254_29
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25333..25563
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QFE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25009.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_254_30
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26105..26221
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q919_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25008.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Displaying items 1-30 of 82 in total

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