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L1_008_000M1_scaffold_255

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_255_1
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..98)
DNA (96bp) protein (32aa)
anaerobic ribonucleoside-triphosphate reductase activating protein (EC:1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase activating protein n=1 Tax=Alistipes sp. CAG:268 RepID=R6VF89_9BACT
Anaerobic ribonucleoside-triphosphate reductase activating protein {ECO:0000313|EMBL:CDC96988.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
L1_008_000M1_scaffold_255_2
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(103..2196)
DNA (2094bp) protein (698aa)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YNI7_ALIFI
anaerobic ribonucleoside-triphosphate reductase
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:AFL78555.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L1_008_000M1_scaffold_255_3
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2602..3348)
DNA (747bp) protein (249aa)
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
NAD-dependent protein deacylase n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MXF5_9BACT
NAD-dependent protein deacetylase, SIR2 family
L1_008_000M1_scaffold_255_4
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3628..5052)
DNA (1425bp) protein (475aa)
glutamate decarboxylase (EC:4.1.1.15)
Glutamate decarboxylase {ECO:0000256|RuleBase:RU361171, ECO:0000313|EMBL:CBK63002.1}; EC=4.1.1.15 {ECO:0000256|RuleBase:RU361171, ECO:0000313|EMBL:CBK63002.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
glutamate decarboxylase n=1 Tax=Alistipes sp. JC136 RepID=UPI0002885EAB
L1_008_000M1_scaffold_255_5
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5179..5943
DNA (765bp) protein (255aa)
3-oxo-5-alpha-steroid 4-dehydrogenase. (EC:1.3.99.5)
3-oxo-5-alpha-steroid 4-dehydrogenase n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JH57_9BACT
3-oxo-5-alpha-steroid 4-dehydrogenase {ECO:0000313|EMBL:CDE62943.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L1_008_000M1_scaffold_255_6
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5948..7186
DNA (1239bp) protein (413aa)
Oxidoreductase, FAD/FMN-binding protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MDU6_9BACT
Oxidoreductase, FAD/FMN-binding protein {ECO:0000313|EMBL:EFR56910.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
NADH:flavin oxidoreductase
L1_008_000M1_scaffold_255_7
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7189..8001
DNA (813bp) protein (271aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MXG9_9BACT
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EDS02293.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
short-chain dehydrogenase
L1_008_000M1_scaffold_255_8
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8007..8639
DNA (633bp) protein (211aa)
HAD hydrolase family IA variant 3 n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JH59_9BACT
HAD hydrolase family IA variant 3 {ECO:0000313|EMBL:CDE62948.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
haloacid dehalogenase superfamily protein
L1_008_000M1_scaffold_255_9
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8666..11215
DNA (2550bp) protein (850aa)
Uncharacterized protein involved in outer membrane biogenesis n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YQ98_ALIFI
hypothetical protein
Uncharacterized protein involved in outer membrane biogenesis {ECO:0000313|EMBL:AFL79166.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L1_008_000M1_scaffold_255_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11927..12274)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AG16_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86072.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L1_008_000M1_scaffold_255_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12536..13444
DNA (909bp) protein (303aa)
TonB-dependent receptor plug domain protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BEH1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN10767.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
TonB-linked outer membrane receptor
L1_008_000M1_scaffold_255_12
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13514..15010
DNA (1497bp) protein (499aa)
Putative TonB-linked outer membrane receptor n=1 Tax=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) RepID=Q8A621_BACTN
TonB-linked outer membrane receptor
Putative TonB-linked outer membrane receptor {ECO:0000313|EMBL:AAO77172.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L1_008_000M1_scaffold_255_13
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15037..16410
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TDZ4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY83519.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L1_008_000M1_scaffold_255_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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16486..17712
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9EHN4_9BACE
Peptidase propeptide and YPEB domain protein {ECO:0000313|EMBL:KDS48339.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
iron uptake factor
L1_008_000M1_scaffold_255_15
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17824..18897)
DNA (1074bp) protein (358aa)
Radical SAM additional 4Fe4S-binding domain protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YQ96_ALIFI
radical SAM additional 4Fe4S-binding domain-containing protein
Radical SAM additional 4Fe4S-binding domain protein {ECO:0000313|EMBL:AFL79164.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L1_008_000M1_scaffold_255_16
unknown

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comp(18899..19156)
DNA (258bp) protein (86aa)

This feature has no annotations

L1_008_000M1_scaffold_255_17
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19324..19524
DNA (201bp) protein (67aa)
Cold-shock DNA-binding domain protein n=3 Tax=root RepID=B0MXG2_9BACT
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EDS02286.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
cold shock protein
L1_008_000M1_scaffold_255_18
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19683..20918
DNA (1236bp) protein (412aa)
6-phosphofructokinase n=3 Tax=Alistipes RepID=I3YQ92_ALIFI
6-phosphofructokinase
Phosphofructokinase {ECO:0000313|EMBL:EFR56909.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L1_008_000M1_scaffold_255_19
unknown

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comp(21029..21487)
DNA (459bp) protein (153aa)

This feature has no annotations

L1_008_000M1_scaffold_255_20
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21576..22073)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI0002ECDB95
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBK62991.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L1_008_000M1_scaffold_255_21
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22250..22447
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XWP6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD26040.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_008_000M1_scaffold_255_22
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22462..22794
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00036E68E1
Uncharacterized protein {ECO:0000313|EMBL:CDD26041.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Protein of unknown function (DUF1469).
L1_008_000M1_scaffold_255_23
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23069..23626)
DNA (558bp) protein (186aa)
Rubrerythrin n=1 Tax=Alistipes sp. CAG:268 RepID=R6VQ20_9BACT
Rubrerythrin {ECO:0000313|EMBL:CDD26042.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
rubrerythrin
L1_008_000M1_scaffold_255_24
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23793..24722)
DNA (930bp) protein (310aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IJ75_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK62987.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L1_008_000M1_scaffold_255_25
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24890..26602
DNA (1713bp) protein (571aa)
Amino acid/polyamine/organocation transporter, APC superfamily n=2 Tax=Alistipes RepID=I3YQ84_ALIFI
amino acid/polyamine/organocation transporter
Amino acid/polyamine/organocation transporter, APC superfamily {ECO:0000313|EMBL:AFL79152.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L1_008_000M1_scaffold_255_26
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26605..27639
DNA (1035bp) protein (345aa)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L-glutaminase (EC:3.5.1.2)
Glutaminase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XWP9_9BACT
L1_008_000M1_scaffold_255_27
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27902..29629)
DNA (1728bp) protein (576aa)
Acyl-CoA dehydrogenase n=2 Tax=Alistipes RepID=I3YQ80_ALIFI
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase C-terminal domain protein {ECO:0000313|EMBL:CCZ77256.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L1_008_000M1_scaffold_255_28
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29629..30648)
DNA (1020bp) protein (340aa)
electron transfer flavoprotein subunit alpha n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003157A9C
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:CDC99114.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
Electron transfer flavoprotein, alpha subunit
L1_008_000M1_scaffold_255_29
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30664..31542)
DNA (879bp) protein (293aa)
Electron transfer flavoprotein domain protein n=2 Tax=Alistipes RepID=B0MST1_9BACT
Electron transfer flavoprotein domain protein {ECO:0000313|EMBL:EDS04416.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
electron transfer flavoprotein subunit beta
L1_008_000M1_scaffold_255_30
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31570..32835)
DNA (1266bp) protein (422aa)
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Adenylosuccinate synthetase n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YQ77_ALIFI
Displaying items 1-30 of 62 in total

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