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L1_008_000M1_scaffold_256

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_256_1
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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364..1137
DNA (774bp) protein (258aa)
Transcriptional regulator, Sir2 family n=2 Tax=Bifidobacterium RepID=A7A6E5_BIFAD
Transcriptional regulator Sir2 family {ECO:0000313|EMBL:CCY20231.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
Sir2-type regulatory protein
L1_008_000M1_scaffold_256_2
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1238..2503)
DNA (1266bp) protein (422aa)
Threonine dehydratase {ECO:0000313|EMBL:KFI98722.1}; EC=4.3.1.19 {ECO:0000313|EMBL:KFI98722.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Threonine ammonia-lyase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6E6_BIFAD
threonine dehydratase
L1_008_000M1_scaffold_256_3
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2665..4485)
DNA (1821bp) protein (607aa)
Oligo-1 6-glucosidase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GSV6_9BIFI
Oligo-1,6-glucosidase {ECO:0000313|EMBL:AII77084.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
oligo-1,6-glucosidase
L1_008_000M1_scaffold_256_4
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4803..5693)
DNA (891bp) protein (297aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6E9_BIFAD
sugar permease of ABC transporter system
ABC transporter, permease protein {ECO:0000313|EMBL:EDN82748.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L1_008_000M1_scaffold_256_5
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5712..6644)
DNA (933bp) protein (311aa)
Sugar permease of ABC transporter system n=3 Tax=Bifidobacterium RepID=A1A3S1_BIFAA
sugar permease of ABC transporter system
Sugar permease of ABC transporter system {ECO:0000313|EMBL:AII77086.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_256_6
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6659..7999)
DNA (1341bp) protein (447aa)
Sugar binding protein of ABC transporter system n=3 Tax=Bifidobacterium RepID=A1A3S2_BIFAA
Sugar binding protein of ABC transporter system {ECO:0000313|EMBL:KFI98726.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
sugar binding protein of ABC transporter system
L1_008_000M1_scaffold_256_7
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8137..9375
DNA (1239bp) protein (413aa)
ROK family protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6F3_BIFAD
NagC/XylR-type transcriptional regulator {ECO:0000313|EMBL:KFI98727.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
putative NagC/XylR-type transcriptional regulator
L1_008_000M1_scaffold_256_8
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9495..11789)
DNA (2295bp) protein (765aa)
Alpha-galactosidase {ECO:0000313|EMBL:KFI86746.1}; EC=3.2.1.22 {ECO:0000313|EMBL:KFI86746.1};; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
Alpha-galactosidase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GSE1_9BIFI
alpha-galactosidase
L1_008_000M1_scaffold_256_9
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11895..12470)
DNA (576bp) protein (192aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Possible cytidine and deoxycytidylate deaminase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A3S5_BIFAA
mesJ; cytidine and deoxycytidylate deaminase
L1_008_000M1_scaffold_256_10
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12524..14608
DNA (2085bp) protein (695aa)
Probable NhaP-type Na(+)/H(+) exchanger n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A3S6_BIFAA
Na+/H+ antiporter {ECO:0000313|EMBL:KFI86748.1}; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
NhaP-type Na(+)/H(+) exchanger
L1_008_000M1_scaffold_256_11
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14969..15751
DNA (783bp) protein (261aa)
Phospholipase/carboxylesterase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6F9_BIFAD
putative phospholipase/carboxylesterase
Phospholipase/carboxylesterase {ECO:0000313|EMBL:AII77092.1}; Putative phospholipase/carboxylesterase {ECO:0000313|EMBL:AJE06725.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_256_12
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15756..16337)
DNA (582bp) protein (194aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146, ECO:0000256|SAAS:SAAS00054754};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Deoxycytidine triphosphate deaminase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=DCD_BIFAA
deoxycytidine triphosphate deaminase
L1_008_000M1_scaffold_256_13
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16527..19604)
DNA (3078bp) protein (1026aa)
Putative calcium-translocating P-type ATPase PMCA-type n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H5A6_9BIFI
Putative calcium-translocating P-type ATPase PMCA-type {ECO:0000313|EMBL:CCY20117.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
calcium-transporting ATPase
L1_008_000M1_scaffold_256_14
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19960..23109
DNA (3150bp) protein (1050aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
Beta galactosidase small chain n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6G3_BIFAD
beta-galactosidase
L1_008_000M1_scaffold_256_15
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23288..24145
DNA (858bp) protein (286aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A1A3T1_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY20114.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L1_008_000M1_scaffold_256_16
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24306..25337
DNA (1032bp) protein (344aa)
LacI-family transcriptional regulator n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GSD0_9BIFI
LacI family transcriptional regulator
LacI family transcriptional regulator {ECO:0000313|EMBL:AII77097.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_256_17
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25592..26899
DNA (1308bp) protein (436aa)
ABC transporter, solute-binding protein n=2 Tax=Bifidobacterium RepID=A7A6G7_BIFAD
ABC transporter, solute-binding protein
ABC transporter solute-binding protein {ECO:0000313|EMBL:CCY20112.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L1_008_000M1_scaffold_256_18
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27080..28015
DNA (936bp) protein (312aa)
ABC transporter_membrane spanning protein[sugar] n=3 Tax=Bifidobacterium RepID=A1A3T4_BIFAA
ABC transporter membrane component
ABC transporter_membrane spanning protein[sugar] {ECO:0000313|EMBL:BAF40367.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L1_008_000M1_scaffold_256_19
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28077..28955
DNA (879bp) protein (293aa)
Sugar permeases n=2 Tax=Bifidobacterium adolescentis RepID=A1A3T5_BIFAA
sugar permease
ABC transporter, permease protein {ECO:0000313|EMBL:EDN82768.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L1_008_000M1_scaffold_256_20
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29142..30272
DNA (1131bp) protein (377aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A1A3T6_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF40369.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L1_008_000M1_scaffold_256_21
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30436..30555
DNA (120bp) protein (40aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE06735.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_256_22
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30605..30730
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GMC0_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII77102.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_256_23
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31115..32398)
DNA (1284bp) protein (428aa)
Transporter, major facilitator family protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6H2_BIFAD
Permease {ECO:0000313|EMBL:KIM01850.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
conserved hypothetical transport protein
L1_008_000M1_scaffold_256_24
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32495..33481
DNA (987bp) protein (329aa)
RNA methyltransferase TrmH family group 3 n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GLS6_9BIFI
tRNA/rRNA methyltransferase protein
RNA methyltransferase {ECO:0000313|EMBL:KIM01849.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_256_25
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33551..34936)
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6H4_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:EDN82773.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
hypothetical protein
L1_008_000M1_scaffold_256_26
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35207..36334)
DNA (1128bp) protein (376aa)
ATP binding protein of ABC transporter for sugars n=2 Tax=Bifidobacterium adolescentis RepID=A1A3U1_BIFAA
ATP binding protein of ABC transporter for sugars
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN82775.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L1_008_000M1_scaffold_256_27
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36625..37380
DNA (756bp) protein (252aa)
Two-component response regulator n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A3U2_BIFAA
Two-component response regulator {ECO:0000313|EMBL:KFI86761.1}; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
virR; two-component response regulator
L1_008_000M1_scaffold_256_28
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37377..38717
DNA (1341bp) protein (447aa)
Two-component sensor histidine kinase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A3U3_BIFAA
virS; two-component sensor histidine kinase
Two-component sensor histidine kinase {ECO:0000313|EMBL:BAF40376.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L1_008_000M1_scaffold_256_29
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38760..40070)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A3U4_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF40377.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L1_008_000M1_scaffold_256_30
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40678..40881
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H5L5_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY20011.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
Displaying items 1-30 of 51 in total

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