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L1_008_000M1_scaffold_260

Search features with annotation key words

Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_260_1
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..112)
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6E3_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:EDN82742.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L1_008_000M1_scaffold_260_2
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(436..1893)
DNA (1458bp) protein (486aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A7D7_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:EDN82398.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
DNA polymerase III
L1_008_000M1_scaffold_260_3
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2164..3612
DNA (1449bp) protein (483aa)
Glutamate decarboxylase {ECO:0000256|RuleBase:RU361171}; EC=4.1.1.15 {ECO:0000256|RuleBase:RU361171};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Glutamate decarboxylase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A7D8_BIFAD
Glutamate decarboxylase
L1_008_000M1_scaffold_260_4
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3689..5359
DNA (1671bp) protein (557aa)
Putative glutamate/gamma-aminobutyrate antiporter n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A7E0_BIFAD
Amino acid transporter {ECO:0000313|EMBL:KFI90824.1}; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
APC family amino acid antiporter
L1_008_000M1_scaffold_260_5
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5514..6170)
DNA (657bp) protein (219aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
Peptide deformylase n=3 Tax=Bifidobacterium RepID=DEF_BIFAA
N-formylmethionyl-tRNA deformylase
L1_008_000M1_scaffold_260_6
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6180..7562)
DNA (1383bp) protein (461aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078319}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078300};; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
Phosphoglucosamine mutase n=3 Tax=Bifidobacterium RepID=GLMM_BIFAA
phosphomannomutase
L1_008_000M1_scaffold_260_7
Bifidobacterium thermacidophilum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7720..8373)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RB61_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFJ00284.1}; TaxID=212365 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium thermacidophilum subsp. porcinum.;"
hypothetical protein
L1_008_000M1_scaffold_260_8
Bifidobacterium moukalabense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8762..12673)
DNA (3912bp) protein (1304aa)
DNA segregation ATPase and related proteins (FtsK/SpoIIIE family) n=2 Tax=Bifidobacterium dentium RepID=D2Q5E4_BIFDB
ATP-binding protein {ECO:0000313|EMBL:ETY72283.1}; TaxID=1435051 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium moukalabense DSM 27321.;"
DNA segregation ATPase-like protein
L1_008_000M1_scaffold_260_9
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12670..13896)
DNA (1227bp) protein (409aa)
FHA domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5D6_9BIFI
FHA domain protein {ECO:0000313|EMBL:EFM41860.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
transRDD family protein
L1_008_000M1_scaffold_260_10
Bifidobacterium moukalabense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13896..15092)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q5D5_9BIFI
Membrane protein {ECO:0000313|EMBL:ETY72285.1}; TaxID=1435051 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium moukalabense DSM 27321.;"
hypothetical protein
L1_008_000M1_scaffold_260_11
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15085..15495)
DNA (411bp) protein (137aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S762_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETO95821.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L1_008_000M1_scaffold_260_12
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15577..16434)
DNA (858bp) protein (286aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S761_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB10163.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_000M1_scaffold_260_13
Bifidobacterium moukalabense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16467..17675)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5D2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETY72288.1}; TaxID=1435051 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium moukalabense DSM 27321.;"
hypothetical protein
L1_008_000M1_scaffold_260_14
Bifidobacterium moukalabense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17731..19185)
DNA (1455bp) protein (485aa)
Putative epstein-Barr nuclear antigen 1 n=2 Tax=Bifidobacterium dentium RepID=E0Q5D1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETY72289.1}; TaxID=1435051 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium moukalabense DSM 27321.;"
hypothetical protein
L1_008_000M1_scaffold_260_15
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19216..21021)
DNA (1806bp) protein (602aa)
Peptidase, S8/S53 family {ECO:0000313|EMBL:ETO95832.1}; EC=3.4.21.- {ECO:0000313|EMBL:ETO95832.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
serine protease (EC:3.4.21.96)
Peptidase, S8/S53 family (Fragment) n=2 Tax=Bifidobacterium dentium RepID=E1NBM4_9BIFI
L1_008_000M1_scaffold_260_16
unknown

Not on your lists

21097..21741
DNA (645bp) protein (215aa)

This feature has no annotations

L1_008_000M1_scaffold_260_17
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21596..21883)
DNA (288bp) protein (96aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S756_9BIFI
ESAT-6-like protein {ECO:0000256|RuleBase:RU362001}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
glnD; [protein-PII] uridylyltransferase
L1_008_000M1_scaffold_260_18
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21925..22236)
DNA (312bp) protein (104aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S755_9BIFI
hypothetical protein
ESAT-6-like protein {ECO:0000256|RuleBase:RU362001}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_000M1_scaffold_260_19
Bifidobacterium moukalabense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22560..23957
DNA (1398bp) protein (466aa)
Putative type VII secretion integral membrane protein EccD n=2 Tax=Bifidobacterium dentium RepID=E0Q5C5_9BIFI
Type VII secretion protein {ECO:0000313|EMBL:ETY71254.1}; TaxID=1435051 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium moukalabense DSM 27321.;"
CD9/CD37/CD63 antigen
L1_008_000M1_scaffold_260_20
Bifidobacterium moukalabense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23989..26607
DNA (2619bp) protein (873aa)
serine protease (EC:3.4.21.48)
Type VII secretion protein EccB n=2 Tax=Bifidobacterium dentium RepID=E0Q5C4_9BIFI
Serine protease {ECO:0000313|EMBL:ETY71253.1}; TaxID=1435051 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium moukalabense DSM 27321.;"
L1_008_000M1_scaffold_260_21
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26694..29303)
DNA (2610bp) protein (870aa)
Aminopeptidase N {ECO:0000313|EMBL:KFI97079.1}; EC=3.4.11.2 {ECO:0000313|EMBL:KFI97079.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Membrane alanyl aminopeptidase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GSC4_9BIFI
aminopeptidase N
L1_008_000M1_scaffold_260_22
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29391..31370)
DNA (1980bp) protein (660aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A7E5_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:EDN82406.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
metallo-beta-lactamase
L1_008_000M1_scaffold_260_23
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31480..32442)
DNA (963bp) protein (321aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A2Z5_BIFAA
L1_008_000M1_scaffold_260_24
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32456..33742)
DNA (1287bp) protein (429aa)
Transporter, major facilitator family protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A7E7_BIFAD
MFS family transporter
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDN82408.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L1_008_000M1_scaffold_260_25
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33834..34721)
DNA (888bp) protein (296aa)
Transcriptional regulator, RpiR family n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A7E8_BIFAD
RpiR family transcriptional regulator {ECO:0000313|EMBL:KIM01771.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
RpiR family transcriptional regulatory protein
L1_008_000M1_scaffold_260_26
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34964..35800
DNA (837bp) protein (279aa)
Putative allantoinase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A2Z8_BIFAA
pucH; putative allantoinase
Putative allantoinase {ECO:0000313|EMBL:BAF40081.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L1_008_000M1_scaffold_260_27
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35901..38933)
DNA (3033bp) protein (1011aa)
Copper-exporting ATPase {ECO:0000313|EMBL:EDN82411.1}; EC=3.6.3.4 {ECO:0000313|EMBL:EDN82411.1};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Copper-exporting ATPase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A7F0_BIFAD
ActP copper transport ATPase
L1_008_000M1_scaffold_260_28
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39022..39312
DNA (291bp) protein (97aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A1A300_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII76831.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_260_29
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39387..40139)
DNA (753bp) protein (251aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A7F2_BIFAD
dihydrodipicolinate reductase
L1_008_000M1_scaffold_260_30
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(40310..41677)
DNA (1368bp) protein (456aa)
Transporter, major facilitator family protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A7F3_BIFAD
putative transport protein
Putative transport protein {ECO:0000313|EMBL:AJE06396.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Displaying items 1-30 of 92 in total

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