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L1_008_000M1_scaffold_264

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Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_264_1
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(89..742)
DNA (654bp) protein (218aa)
Chloramphenicol O-acetyltransferase {ECO:0000313|EMBL:EDM62000.1}; EC=2.3.1.28 {ECO:0000313|EMBL:EDM62000.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Chloramphenicol O-acetyltransferase (EC:2.3.1.28)
Chloramphenicol O-acetyltransferase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJR5_9FIRM
L1_008_000M1_scaffold_264_2
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(919..2085)
DNA (1167bp) protein (389aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
deoB; putative phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase n=1 Tax=Dorea longicatena CAG:42 RepID=R7G5P3_9FIRM
L1_008_000M1_scaffold_264_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2273..3139)
DNA (867bp) protein (289aa)
Aldo/keto reductase family oxidoreductase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J635_9CLOT
Aldo/keto reductase family oxidoreductase {ECO:0000313|EMBL:CCY44387.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Aldo/keto reductases, related to diketogulonate reductase
L1_008_000M1_scaffold_264_4
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3141..4040)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQ98_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44388.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
dihydrodipicolinate synthase
L1_008_000M1_scaffold_264_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4043..4936)
DNA (894bp) protein (298aa)
tartronate semialdehyde reductase (EC:1.1.1.60)
2-hydroxy-3-oxopropionate reductase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVM1_9CLOT
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:CCY44389.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L1_008_000M1_scaffold_264_6
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4996..6171)
DNA (1176bp) protein (392aa)
L-rhamnonate dehydratase {ECO:0000313|EMBL:KJJ75719.1}; EC=4.2.1.90 {ECO:0000313|EMBL:KJJ75719.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQ28_9FIRM
mandelate racemase/muconate lactonizing protein
L1_008_000M1_scaffold_264_7
Brevibacillus borstelensis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6202..7479)
DNA (1278bp) protein (426aa)
TRAP dicarboxylate transporter subunit DctM n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8DMG4_9BACL
TRAP dicarboxylate transporter subunit DctM {ECO:0000313|EMBL:EMT54647.1}; TaxID=1300222 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus borstelensis AK1.;"
TRAP transporter, DctM subunit
L1_008_000M1_scaffold_264_8
Pontibacillus marinus, Pontibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7476..7958)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Bacillus sp. ZYK RepID=UPI0002FE40C8
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KGX91764.1}; TaxID=1385511 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Pontibacillus.;" source="Pontibacillus marinus BH030004 = DSM 16465.;"
tripartite AtP-independent periplasmic transporter subunit DctQ
L1_008_000M1_scaffold_264_9
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7959..8966)
DNA (1008bp) protein (336aa)
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WIZ1_DESOD
C4-dicarboxylate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJS22974.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
TRAP dicarboxylate family transporter subunit DctP
L1_008_000M1_scaffold_264_10
Acidaminococcus fermentans, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9125..9781
DNA (657bp) protein (219aa)
Transcriptional regulator, GntR family n=1 Tax=Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4) RepID=D2RMQ7_ACIFV
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADB48359.1}; TaxID=591001 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4).;"
L1_008_000M1_scaffold_264_11
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9791..10906
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MG66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS70020.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
Sugar diacid utilization regulator
L1_008_000M1_scaffold_264_12
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11150..12277
DNA (1128bp) protein (376aa)
glycerate kinase (EC:2.7.1.31)
Glycerate kinase n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MG11_9FIRM
Glycerate kinase {ECO:0000313|EMBL:EOS70019.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
L1_008_000M1_scaffold_264_13
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12327..14267)
DNA (1941bp) protein (647aa)
Beta-lactamase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FPT0_9FIRM
Beta-lactamase {ECO:0000313|EMBL:CDE16850.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
beta-lactamase
L1_008_000M1_scaffold_264_14
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(14433..15026)
DNA (594bp) protein (198aa)
50S ribosomal protein L25 n=2 Tax=Dorea RepID=A6BJS2_9FIRM
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
LSU ribosomal protein L25P
L1_008_000M1_scaffold_264_15
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15197..15661)
DNA (465bp) protein (155aa)
Transporter, major facilitator family protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LE42_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:EET61246.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
xylose transporter
L1_008_000M1_scaffold_264_16
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15914..16543
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62009.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
nagC; NagC protein
L1_008_000M1_scaffold_264_17
unknown

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comp(16625..17881)
DNA (1257bp) protein (419aa)
Transposase, IS605 OrfB family, central region n=1 Tax=butyrate-producing bacterium SSC/2 RepID=D4N0J1_9FIRM
transposase, IS605 OrfB family, central region
Transposase, IS605 OrfB family, central region {ECO:0000313|EMBL:CBL38386.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_264_18
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17935..18312)
DNA (378bp) protein (126aa)
Transposase n=1 Tax=Blautia sp. CAG:237 RepID=R6L5U8_9FIRM
Transposase {ECO:0000313|EMBL:CDB77511.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
Transposase and inactivated derivatives
L1_008_000M1_scaffold_264_19
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19189..21342)
DNA (2154bp) protein (718aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
UvrD/REP helicase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FQF6_9FIRM
UvrD/REP helicase
L1_008_000M1_scaffold_264_20
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21352..24054)
DNA (2703bp) protein (901aa)
DEAD/DEAH box helicase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJS7_9FIRM
DEAD/DEAH box helicase {ECO:0000313|EMBL:EDM62012.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
DEAD/DEAH box helicase domain-containing protein
L1_008_000M1_scaffold_264_21
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24057..24602)
DNA (546bp) protein (182aa)
Fructose-2,6-bisphosphatase (EC:5.4.2.1)
Phosphoglycerate mutase family protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FNH6_9FIRM
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:CDE16844.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_264_22
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24739..25884)
DNA (1146bp) protein (382aa)
Oxidoreductase nitrogenase component 1 n=1 Tax=Dorea longicatena CAG:42 RepID=R7FQQ4_9FIRM
Oxidoreductase nitrogenase component 1 {ECO:0000313|EMBL:CDE16843.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Nitrogenase molybdenum-iron protein, alpha and beta chains
L1_008_000M1_scaffold_264_23
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25881..27200)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62015.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Nitrogenase component 1 type Oxidoreductase.
L1_008_000M1_scaffold_264_24
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27194..28024)
DNA (831bp) protein (277aa)
Nitrogenase subunit NifH (ATPase) (EC:1.18.6.1)
Putative nitrogenase iron protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJT1_9FIRM
Putative nitrogenase iron protein {ECO:0000313|EMBL:EDM62016.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L1_008_000M1_scaffold_264_25
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28068..28331)
DNA (264bp) protein (88aa)
Putative iron-only hydrogenase system regulator n=2 Tax=Dorea RepID=A6BJT2_9FIRM
Putative iron-only hydrogenase system regulator {ECO:0000313|EMBL:EDM62017.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L1_008_000M1_scaffold_264_26
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28379..29425)
DNA (1047bp) protein (349aa)
Hydrogenase expression/formation protein HypE n=1 Tax=Dorea longicatena CAG:42 RepID=R7FNH1_9FIRM
Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:CDE16839.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hydrogenase expression/formation protein HypE
L1_008_000M1_scaffold_264_27
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29461..30507)
DNA (1047bp) protein (349aa)
Hydrogenase expression/formation protein HypD n=1 Tax=Dorea longicatena CAG:42 RepID=R7FQQ0_9FIRM
Hydrogenase expression/formation protein HypD {ECO:0000313|EMBL:CDE16838.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Hydrogenase maturation factor
L1_008_000M1_scaffold_264_28
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30507..30716)
DNA (210bp) protein (70aa)
Putative hydrogenase assembly chaperone HypC/HupF n=1 Tax=Dorea longicatena CAG:42 RepID=R7FSZ2_9FIRM
Putative hydrogenase assembly chaperone HypC/HupF {ECO:0000313|EMBL:CDE16837.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hydrogenase assembly chaperone HypC/HupF
L1_008_000M1_scaffold_264_29
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30718..33057)
DNA (2340bp) protein (780aa)
Carbamoyltransferase HypF n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJT6_9FIRM
Carbamoyltransferase HypF {ECO:0000313|EMBL:EDM62021.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
[NiFe] hydrogenase maturation protein HypF
L1_008_000M1_scaffold_264_30
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33106..34185)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FNG7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE16834.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Nitrogenase molybdenum-iron protein, alpha and beta chains
Displaying items 1-30 of 58 in total

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