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L1_008_000M1_scaffold_267

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_267_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..157)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G8V0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV01755.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L1_008_000M1_scaffold_267_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(398..913)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G8V0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV01755.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L1_008_000M1_scaffold_267_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(910..3765)
DNA (2856bp) protein (952aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G8U9_9FIRM
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EEV01754.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
glycoside hydrolase family protein
L1_008_000M1_scaffold_267_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3762..4190)
DNA (429bp) protein (143aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G8U9_9FIRM
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EEV01754.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
glycoside hydrolase family protein
L1_008_000M1_scaffold_267_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4366..5700)
DNA (1335bp) protein (445aa)
primary replicative DNA helicase (EC:3.6.1.-)
Primary replicative DNA helicase {ECO:0000313|EMBL:CBL10234.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBL10234.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Primary replicative DNA helicase n=4 Tax=Roseburia RepID=D4KTN2_9FIRM
L1_008_000M1_scaffold_267_6
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5703..6149)
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=3 Tax=Roseburia RepID=D4L1I0_9FIRM
LSU ribosomal protein L9P
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_267_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6171..8225)
DNA (2055bp) protein (685aa)
Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KTN0_9FIRM
Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain {ECO:0000313|EMBL:CBL10232.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain
L1_008_000M1_scaffold_267_8
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8426..9109)
DNA (684bp) protein (228aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R6BUS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA56972.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L1_008_000M1_scaffold_267_9
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9241..10197)
DNA (957bp) protein (319aa)
Sugar kinases, ribokinase family (EC:2.7.1.4)
Kinase, PfkB family n=2 Tax=Roseburia RepID=C7G9C4_9FIRM
Fructokinase-1 {ECO:0000313|EMBL:CDA56973.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_267_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10763..13015)
DNA (2253bp) protein (751aa)
Alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase {ECO:0000313|EMBL:CBL10229.1}; EC=3.2.1.22 {ECO:0000313|EMBL:CBL10229.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Alpha-galactosidase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KTM7_9FIRM
L1_008_000M1_scaffold_267_11
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13040..14722)
DNA (1683bp) protein (561aa)
Glycosidases (EC:3.2.1.10)
Oligo-1 6-glucosidase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B198_9FIRM
Oligo-1 6-glucosidase {ECO:0000313|EMBL:CDA56975.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_267_12
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14804..15781)
DNA (978bp) protein (326aa)
Transcriptional regulators n=2 Tax=Roseburia RepID=D4L1H4_9FIRM
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CDA56976.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_267_13
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15769..17460)
DNA (1692bp) protein (564aa)
Beta-fructosidases (Levanase/invertase) n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BUT3_9FIRM
Beta-fructosidases (Levanase/invertase) {ECO:0000313|EMBL:CDA56977.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Beta-fructosidases (levanase/invertase)
L1_008_000M1_scaffold_267_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17531..17998)
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KTM3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL10225.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000M1_scaffold_267_15
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18355..22473)
DNA (4119bp) protein (1373aa)
Beta-xylanase {ECO:0000256|RuleBase:RU361174}; EC=3.2.1.8 {ECO:0000256|RuleBase:RU361174};; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Putative carbohydrate binding domain protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B1A3_9FIRM
Listeria/Bacterioides repeat
L1_008_000M1_scaffold_267_16
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22707..23303)
DNA (597bp) protein (199aa)
Listeria/Bacterioides repeat n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BD06_9FIRM
Listeria/Bacterioides repeat {ECO:0000313|EMBL:CDA56981.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Listeria/Bacterioides repeat
L1_008_000M1_scaffold_267_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(23512..23775)
DNA (264bp) protein (88aa)
30S ribosomal protein S18 n=4 Tax=Roseburia RepID=D4KTM0_9FIRM
SSU ribosomal protein S18P
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_267_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23834..24280)
DNA (447bp) protein (149aa)
Single-stranded DNA-binding protein n=4 Tax=Roseburia RepID=D4KTL9_9FIRM
single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000M1_scaffold_267_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(24330..24620)
DNA (291bp) protein (97aa)
30S ribosomal protein S6 n=4 Tax=Roseburia RepID=D4KTL8_9FIRM
SSU ribosomal protein S6P
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_267_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24739..24939)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G9A8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV01581.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L1_008_000M1_scaffold_267_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24962..25435)
DNA (474bp) protein (158aa)
Uncharacterized conserved protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KTL6_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBL10218.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000M1_scaffold_267_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25477..26199)
DNA (723bp) protein (241aa)
NAD-dependent protein deacetylases, SIR2 family (EC:3.5.1.-)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968, ECO:0000313|EMBL:CBL13451.1};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
NAD-dependent protein deacetylase n=2 Tax=Roseburia RepID=D4L1G1_9FIRM
L1_008_000M1_scaffold_267_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26202..27908)
DNA (1707bp) protein (569aa)
Methyl-accepting chemotaxis protein n=2 Tax=Roseburia intestinalis RepID=D4KTL4_9FIRM
Methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CBL10216.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000M1_scaffold_267_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28228..28758)
DNA (531bp) protein (177aa)
Uncharacterized membrane protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L1F9_9FIRM
Uncharacterized membrane protein
Uncharacterized membrane protein {ECO:0000313|EMBL:CBL13449.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_267_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28811..30475)
DNA (1665bp) protein (555aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G9A4_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EEV01577.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
diguanylate cyclase (GGDEF) domain
L1_008_000M1_scaffold_267_26
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30567..31187)
DNA (621bp) protein (207aa)
Uncharacterized membrane protein, required for spore maturation in B.subtilis n=2 Tax=Roseburia intestinalis RepID=D4KTL2_9FIRM
Uncharacterized membrane protein, required for spore maturation in B.subtilis.
Uncharacterized membrane protein, required for spore maturation in B.subtilis {ECO:0000313|EMBL:CBL13447.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_267_27
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31334..33211
DNA (1878bp) protein (626aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BBR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA56536.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L1_008_000M1_scaffold_267_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33217..34062)
DNA (846bp) protein (282aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Ribosomal RNA small subunit methyltransferase I n=2 Tax=Roseburia intestinalis RepID=D4L1F6_9FIRM
conserved hypothetical protein TIGR00096
L1_008_000M1_scaffold_267_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34153..34986)
DNA (834bp) protein (278aa)
ABC transporter, ATP-binding protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G998_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEV01647.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
L1_008_000M1_scaffold_267_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35014..35796)
DNA (783bp) protein (261aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=3 Tax=Roseburia RepID=D4L1F4_9FIRM
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:CBL13444.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Displaying items 1-30 of 70 in total

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