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L1_008_000M1_scaffold_275

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Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_275_1
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(345..1646)
DNA (1302bp) protein (434aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=2 Tax=Dorea RepID=R7G2Y0_9FIRM
L1_008_000M1_scaffold_275_2
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1636..2730)
DNA (1095bp) protein (365aa)
Prephenate dehydrogenase {ECO:0000313|EMBL:EDM62838.1}; EC=1.3.1.12 {ECO:0000313|EMBL:EDM62838.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHT7_9FIRM
L1_008_000M1_scaffold_275_3
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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3024..5099
DNA (2076bp) protein (692aa)
translation elongation factor 2 (EF-2/EF-G) (EC:3.6.5.3)
Putative translation elongation factor G n=1 Tax=Dorea longicatena CAG:42 RepID=R7G3J1_9FIRM
Putative translation elongation factor G {ECO:0000313|EMBL:CDE21268.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_275_4
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5242..6597
DNA (1356bp) protein (452aa)
TrkA N-terminal domain protein n=2 Tax=Dorea RepID=A6BHT5_9FIRM
TrkA N-terminal domain protein {ECO:0000313|EMBL:EDM62836.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
K+ transport systems, NAD-binding component
L1_008_000M1_scaffold_275_5
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6615..8060
DNA (1446bp) protein (482aa)
Cation transport protein n=2 Tax=Dorea RepID=R7G2C4_9FIRM
Cation transport protein {ECO:0000313|EMBL:CDE21270.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Trk-type K+ transport systems, membrane components
L1_008_000M1_scaffold_275_6
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8132..9793
DNA (1662bp) protein (554aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BHT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE21271.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_275_7
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9838..10776
DNA (939bp) protein (313aa)
Transporter auxin efflux carrier (AEC) family protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G5J3_9FIRM
Transporter auxin efflux carrier (AEC) family protein {ECO:0000313|EMBL:CDE21272.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Predicted permeases
L1_008_000M1_scaffold_275_8
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10841..12097)
DNA (1257bp) protein (419aa)
Bacterial capsule synthesis protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G1G4_9FIRM
Bacterial capsule synthesis protein {ECO:0000313|EMBL:CDE21274.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
L1_008_000M1_scaffold_275_9
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12198..12620)
DNA (423bp) protein (141aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BHT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE21275.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_275_10
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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13224..15653
DNA (2430bp) protein (810aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=2 Tax=Dorea RepID=A6BHS7_9FIRM
L1_008_000M1_scaffold_275_11
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16108..16641
DNA (534bp) protein (178aa)
TIGR00730 family protein n=2 Tax=Dorea RepID=A6BHS5_9FIRM
TIGR00730 family protein {ECO:0000313|EMBL:CDE21277.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
conserved hypothetical protein, DprA/Smf-related, family 2
L1_008_000M1_scaffold_275_12
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16744..16881
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G3J8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE21278.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_275_13
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17047..17739)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G1G8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE21279.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Uncharacterised protein family (UPF0153).
L1_008_000M1_scaffold_275_14
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17853..19016
DNA (1164bp) protein (388aa)
Exonuclease SbcCD, D subunit n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHS2_9FIRM
Exonuclease SbcCD, D subunit {ECO:0000313|EMBL:EDM62823.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
exonuclease SbcD
L1_008_000M1_scaffold_275_15
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19017..22220
DNA (3204bp) protein (1068aa)
Exonuclease SbcCD C subunit n=1 Tax=Dorea longicatena CAG:42 RepID=R7G1H1_9FIRM
Exonuclease SbcCD C subunit {ECO:0000313|EMBL:CDE21284.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
SMC domain-containing protein
L1_008_000M1_scaffold_275_16
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22345..23958)
DNA (1614bp) protein (538aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
CTP synthase (EC:6.3.4.2)
CTP synthase n=1 Tax=Dorea longicatena CAG:42 RepID=R7G2E1_9FIRM
L1_008_000M1_scaffold_275_17
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24022..25515)
DNA (1494bp) protein (498aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BHR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62820.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L1_008_000M1_scaffold_275_18
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25751..27766
DNA (2016bp) protein (672aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
ATP-dependent metalloprotease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=2 Tax=Dorea RepID=A6BHR8_9FIRM
L1_008_000M1_scaffold_275_19
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27892..28578
DNA (687bp) protein (229aa)
Precorrin-2 C(20)-methyltransferase n=1 Tax=Dorea longicatena CAG:42 RepID=R7G2Z8_9FIRM
Precorrin-2 C(20)-methyltransferase {ECO:0000313|EMBL:CDE21291.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
precorrin-2 C20-methyltransferase
L1_008_000M1_scaffold_275_20
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28633..30486
DNA (1854bp) protein (618aa)
UvrABC system protein C n=1 Tax=Dorea longicatena CAG:42 RepID=R7G5K7_9FIRM
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
excinuclease ABC, C subunit
L1_008_000M1_scaffold_275_21
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30538..31467
DNA (930bp) protein (310aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Hpr(Ser) kinase/phosphatase (EC:2.7.1.- 2.7.4.- 2.7.11.-)
HPr kinase/phosphorylase n=2 Tax=Dorea RepID=A6BHR4_9FIRM
L1_008_000M1_scaffold_275_22
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31482..32411
DNA (930bp) protein (310aa)
glucokinase (EC:2.7.1.2)
ROK family protein n=2 Tax=Dorea RepID=A6BHR3_9FIRM
ROK family protein {ECO:0000313|EMBL:CDE21296.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_275_23
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32574..35210)
DNA (2637bp) protein (879aa)
penicillin-binding protein, 1A family (EC:2.4.1.- 3.4.-.-)
Penicillin-binding protein, 1A family n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHR2_9FIRM
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:EDM62813.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L1_008_000M1_scaffold_275_24
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35363..36028
DNA (666bp) protein (222aa)
YigZ family protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHR1_9FIRM
YigZ family protein {ECO:0000313|EMBL:EDM62812.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
thymidylate synthase
L1_008_000M1_scaffold_275_25
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36140..36676)
DNA (537bp) protein (179aa)
Ribosomal subunit interface protein n=2 Tax=Dorea RepID=A6BHR0_9FIRM
Ribosomal subunit interface protein {ECO:0000313|EMBL:CDE17511.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
ribosomal subunit interface protein
L1_008_000M1_scaffold_275_26
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36811..37422)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FUV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17512.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
membrane protein
L1_008_000M1_scaffold_275_27
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37554..37676
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62809.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L1_008_000M1_scaffold_275_28
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37694..39517)
DNA (1824bp) protein (608aa)
GTP-binding protein TypA n=2 Tax=Dorea RepID=A6BHQ7_9FIRM
GTP-binding protein TypA {ECO:0000313|EMBL:EDM62808.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
GTP-binding protein TypA/BipA
L1_008_000M1_scaffold_275_29
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39675..40304
DNA (630bp) protein (210aa)
Single-strand binding family protein n=2 Tax=Dorea RepID=A6BHQ6_9FIRM
Single-strand binding family protein {ECO:0000313|EMBL:EDM62807.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Single-stranded DNA-binding protein
L1_008_000M1_scaffold_275_30
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40399..41289
DNA (891bp) protein (297aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHQ5_9FIRM
Displaying items 1-30 of 52 in total

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