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L1_008_000M1_scaffold_297

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_297_1
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(142..1014)
DNA (873bp) protein (291aa)
Bacterial extracellular solute-binding protein family 3 n=2 Tax=root RepID=R7JTC1_9FIRM
Bacterial extracellular solute-binding protein family 3 {ECO:0000313|EMBL:CDE66891.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
amino acid ABC transporter substrate-binding protein
L1_008_000M1_scaffold_297_2
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(1070..1813)
DNA (744bp) protein (248aa)
amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) (EC:3.6.3.21)
Amino acid ABC transporter ATP-binding protein PAAT family (TC 3.A.1.3.-) n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GZ24_9FIRM
Amino acid ABC transporter ATP-binding protein PAAT family (TC 3.A.1.3.-) {ECO:0000313|EMBL:CCY21014.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L1_008_000M1_scaffold_297_3
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(1817..2494)
DNA (678bp) protein (226aa)
Polar amino acid ABC transporter inner membrane subunit n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GUK3_9FIRM
Polar amino acid ABC transporter inner membrane subunit {ECO:0000313|EMBL:CCY21015.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
polar amino acid ABC transporter inner membrane subunit
L1_008_000M1_scaffold_297_4
Paenibacillus sp. oral taxon 786, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2792..4561)
DNA (1770bp) protein (590aa)
Glycosyl hydrolase family 3 C-terminal domain protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZP0_9BACL
Glycosyl hydrolase family 3 C-terminal domain protein {ECO:0000313|EMBL:EES73779.1}; TaxID=621372 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. oral taxon 786 str. D14.;"
glycoside hydrolase family protein
L1_008_000M1_scaffold_297_5
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4512..5504)
DNA (993bp) protein (331aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Beta-glucosidase-related glycosidases n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RRL3_9FIRM
Beta-glucosidase-related glycosidases {ECO:0000313|EMBL:CDC45716.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L1_008_000M1_scaffold_297_6
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(5588..8263)
DNA (2676bp) protein (892aa)
Putative beta-mannosidase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H9Y2_9FIRM
Putative beta-mannosidase {ECO:0000313|EMBL:CCY21737.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
putative beta-mannosidase
L1_008_000M1_scaffold_297_7
Bacillus hemicellulosilyticus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(8502..10166)
DNA (1665bp) protein (555aa)
extracellular solute-binding protein family 1 n=1 Tax=Paenibacillus elgii RepID=UPI000248C2DE
Putative sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAE31028.1}; TaxID=1236971 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus hemicellulosilyticus JCM 9152.;"
hypothetical protein
L1_008_000M1_scaffold_297_8
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10246..11136)
DNA (891bp) protein (297aa)
binding-protein-dependent transport system inner membrane component n=1 Tax=Paenibacillus elgii RepID=UPI000248C2E0
ABC transporter permease {ECO:0000313|EMBL:KEQ27645.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
binding-protein-dependent transport system inner membrane protein
L1_008_000M1_scaffold_297_9
Bacillus hemicellulosilyticus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11150..12100)
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI00036ED7BA
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:GAE31029.1}; TaxID=1236971 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus hemicellulosilyticus JCM 9152.;"
binding-protein-dependent transport systems inner membrane component
L1_008_000M1_scaffold_297_10
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

13020..13874
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5Y1J2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA15051.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
hypothetical protein
L1_008_000M1_scaffold_297_11
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(13926..15185)
DNA (1260bp) protein (420aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
enolase (EC:4.2.1.11)
Enolase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6ZM70_9FIRM
L1_008_000M1_scaffold_297_12
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15382..16380
DNA (999bp) protein (333aa)
NADH:flavin oxidoreductase n=1 Tax=Clostridium intestinale URNW RepID=U2PPZ5_9CLOT
NADH:flavin oxidoreductase {ECO:0000313|EMBL:ERK28500.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
NADH:flavin oxidoreductase
L1_008_000M1_scaffold_297_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16383..17429
DNA (1047bp) protein (349aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CH49_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHO31583.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L1_008_000M1_scaffold_297_14
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17652..18923)
DNA (1272bp) protein (424aa)
Peptidase M23/M37 family n=1 Tax=Clostridium sp. CAG:1013 RepID=R5ABC6_9CLOT
Peptidase M23/M37 family {ECO:0000313|EMBL:CCX38372.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
Membrane-bound metallopeptidase
L1_008_000M1_scaffold_297_15
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19109..19609)
DNA (501bp) protein (167aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase {ECO:0000313|EMBL:EJF42468.1}; EC=2.7.6.3 {ECO:0000313|EMBL:EJF42468.1};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase n=1 Tax=Clostridium sp. MSTE9 RepID=J1HAS2_9CLOT
L1_008_000M1_scaffold_297_16
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19606..19968)
DNA (363bp) protein (121aa)
dihydroneopterin aldolase (EC:4.1.2.25)
Dihydroneopterin aldolase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A5Z1_9CLOT
Dihydroneopterin aldolase {ECO:0000313|EMBL:CCX38500.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
L1_008_000M1_scaffold_297_17
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19976..20803)
DNA (828bp) protein (276aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
Dihydropteroate synthase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A9H4_9CLOT
dihydropteroate synthase
L1_008_000M1_scaffold_297_18
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(20814..21374)
DNA (561bp) protein (187aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
GTP cyclohydrolase 1 n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6ZJ12_9FIRM
GTP cyclohydrolase 1
L1_008_000M1_scaffold_297_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21479..22372)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZGQ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07648.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L1_008_000M1_scaffold_297_20
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22386..24377)
DNA (1992bp) protein (664aa)
Arylsulfatase n=1 Tax=Eubacterium sp. CAG:156 RepID=R5YWT7_9FIRM
Arylsulfatase {ECO:0000313|EMBL:CDA28989.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
hypothetical protein
L1_008_000M1_scaffold_297_21
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24598..26382)
DNA (1785bp) protein (595aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae bacterium COE1 RepID=R9KJ74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS46539.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
hypothetical protein
L1_008_000M1_scaffold_297_22
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26379..28070)
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KJN6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS46538.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
ABC transporter
L1_008_000M1_scaffold_297_23
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28300..29061
DNA (762bp) protein (254aa)
phosphorylase Pnp/Udp family protein (EC:2.4.2.1)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5ADT8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37521.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
L1_008_000M1_scaffold_297_24
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29223..29903
DNA (681bp) protein (227aa)
Transferase hexapeptide repeat protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A9C0_9CLOT
Transferase hexapeptide repeat protein {ECO:0000313|EMBL:CCX37677.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
hypothetical protein
L1_008_000M1_scaffold_297_25
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29931..31841
DNA (1911bp) protein (637aa)
FHA domain protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AE65_9CLOT
FHA domain protein {ECO:0000313|EMBL:CCX37676.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
hypothetical protein
L1_008_000M1_scaffold_297_26
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31838..33175
DNA (1338bp) protein (446aa)
Penicillin-binding protein transpeptidase domain protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A3K8_9CLOT
Penicillin-binding protein transpeptidase domain protein {ECO:0000313|EMBL:CCX37675.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
putative penicillin-binding protein A
L1_008_000M1_scaffold_297_27
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33430..34875)
DNA (1446bp) protein (482aa)
Trypsin n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A9A0_9CLOT
Trypsin {ECO:0000313|EMBL:CCX38449.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
peptidase S1 and S6 chymotrypsin/Hap
L1_008_000M1_scaffold_297_28
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(35087..35671)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YR11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD30991.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
L1_008_000M1_scaffold_297_29
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35921..36580
DNA (660bp) protein (220aa)
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E (EC:3.1.3.18)
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily subfamily IA variant 1 with third motif having Dx(3-4)D or Dx(3-4)E n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AGG8_9CLOT
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily subfamily IA variant 1 with third motif having Dx(3-4)D or Dx(3-4)E {ECO:0000313|EMBL:CCX38446.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
L1_008_000M1_scaffold_297_30
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(36836..37600)
DNA (765bp) protein (255aa)
Transcriptional regulator AraC family n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IU88_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCY43884.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
ArsR family transcriptional regulator
Displaying items 1-30 of 56 in total

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