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L1_008_000M1_scaffold_307

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_307_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..825)
DNA (825bp) protein (275aa)
MATE efflux family protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEB6_9FIRM
putative efflux protein, MATE family
MATE efflux family protein {ECO:0000313|EMBL:EES76537.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_008_000M1_scaffold_307_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1150..2232
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77682.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L1_008_000M1_scaffold_307_3
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2217..2831
DNA (615bp) protein (205aa)
Integrase n=1 Tax=Clostridium bolteae 90A5 RepID=R0C9G4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFV19670.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L1_008_000M1_scaffold_307_4
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3249..3701
DNA (453bp) protein (151aa)
Hsp20/alpha crystallin family protein n=2 Tax=Dorea RepID=A6BKD2_9FIRM
Hsp20/alpha crystallin family protein {ECO:0000313|EMBL:CDE17168.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
heat shock protein Hsp20
L1_008_000M1_scaffold_307_5
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3925..5013
DNA (1089bp) protein (363aa)
Putative chaperone protein DnaJ n=2 Tax=Dorea RepID=A6BKD1_9FIRM
Putative chaperone protein DnaJ {ECO:0000313|EMBL:CDE17169.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
L1_008_000M1_scaffold_307_6
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5196..6257
DNA (1062bp) protein (354aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase n=2 Tax=Dorea RepID=R7FQP5_9FIRM
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:CDE17170.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_307_7
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6342..7139
DNA (798bp) protein (266aa)
Pentapeptide repeat protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJI7_9FIRM
Pentapeptide repeat protein {ECO:0000313|EMBL:EDM62070.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
pentapeptide repeat-containing protein
L1_008_000M1_scaffold_307_8
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7207..9153
DNA (1947bp) protein (649aa)
Glycosyl hydrolase family 2 TIM barrel domain protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FRM6_9FIRM
Glycosyl hydrolase family 2 TIM barrel domain protein {ECO:0000313|EMBL:CDE17173.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
glycoside hydrolase family protein
L1_008_000M1_scaffold_307_9
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9137..10102
DNA (966bp) protein (322aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
beta-galactosidase (EC:3.2.1.23)
Beta galactosidase small chain n=1 Tax=Dorea longicatena CAG:42 RepID=R7FPE8_9FIRM
L1_008_000M1_scaffold_307_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10092..10640)
DNA (549bp) protein (183aa)
Transcriptional regulator PadR family n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQX1_9CLOT
Transcriptional regulator PadR family {ECO:0000313|EMBL:CCY44593.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
PadR-like family transcriptional regulator
L1_008_000M1_scaffold_307_11
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10824..12158
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VX75_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35507.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Predicted membrane protein
L1_008_000M1_scaffold_307_12
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12242..12994
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FTX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17182.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Predicted permeases
L1_008_000M1_scaffold_307_13
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13076..13432
DNA (357bp) protein (119aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8S1N4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP13545.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L1_008_000M1_scaffold_307_14
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13600..14244
DNA (645bp) protein (215aa)
Formimidoyltetrahydrofolate cyclodeaminase (EC:3.5.4.9 4.3.1.4)
Formiminotransferase-cyclodeaminase n=2 Tax=Dorea RepID=A6BJJ2_9FIRM
Formiminotransferase-cyclodeaminase {ECO:0000313|EMBL:CDE17183.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_307_15
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14320..15171
DNA (852bp) protein (284aa)
methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJJ3_9FIRM
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L1_008_000M1_scaffold_307_16
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15323..16369)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BJJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62077.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Predicted membrane protein
L1_008_000M1_scaffold_307_17
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16558..17445
DNA (888bp) protein (296aa)
LysR substrate binding domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJJ5_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:EDM62078.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Putative transcriptional regulator (LysR family)
L1_008_000M1_scaffold_307_18
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17568..18188
DNA (621bp) protein (207aa)
6-O-methylguanine DNA methyltransferase, DNA binding domain protein n=2 Tax=Dorea RepID=A6BJJ6_9FIRM
6-O-methylguanine DNA methyltransferase DNA binding domain protein {ECO:0000313|EMBL:CDE17188.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
O-6-methylguanine DNA methyltransferase
L1_008_000M1_scaffold_307_19
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18302..18628
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62080.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L1_008_000M1_scaffold_307_20
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18592..18801
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62081.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
transcriptional regulator, LacI family
L1_008_000M1_scaffold_307_21
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18816..19793
DNA (978bp) protein (326aa)
Oxidoreductase, aldo/keto reductase family protein n=2 Tax=Dorea RepID=A6BJJ9_9FIRM
Oxidoreductase aldo/keto reductase family protein {ECO:0000313|EMBL:CDE17191.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
tas2; oxidoreductase
L1_008_000M1_scaffold_307_22
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20034..20489
DNA (456bp) protein (152aa)
Transcriptional regulator, MarR family n=2 Tax=Dorea RepID=A6BJK0_9FIRM
Transcriptional regulator MarR family {ECO:0000313|EMBL:CDE17192.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Transcriptional regulators
L1_008_000M1_scaffold_307_23
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20479..21825
DNA (1347bp) protein (449aa)
MATE efflux family protein n=2 Tax=Dorea RepID=A6BJK1_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDE17194.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
putative efflux protein, MATE family
L1_008_000M1_scaffold_307_24
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21878..22138
DNA (261bp) protein (87aa)
Prevent-host-death family protein n=2 Tax=Dorea RepID=A6BJK2_9FIRM
Prevent-host-death family protein {ECO:0000313|EMBL:CDE17196.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
prevent-host-death family protein
L1_008_000M1_scaffold_307_25
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22431..23792
DNA (1362bp) protein (454aa)
MATE efflux family protein n=2 Tax=Dorea RepID=A6BJK3_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDE17198.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
putative efflux protein, MATE family
L1_008_000M1_scaffold_307_26
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23806..24390
DNA (585bp) protein (195aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BJK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62087.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Cytidylate kinase
L1_008_000M1_scaffold_307_27
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24530..24889
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62088.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Fe2+/Zn2+ uptake regulation proteins
L1_008_000M1_scaffold_307_28
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25242..25760
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FQT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17205.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_307_29
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25781..26917
DNA (1137bp) protein (379aa)
YibE/F-like protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJL0_9FIRM
YibE/F-like protein {ECO:0000313|EMBL:EDM62093.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Predicted multitransmembrane protein
L1_008_000M1_scaffold_307_30
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26911..27660
DNA (750bp) protein (250aa)
YibE/F-like protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJL1_9FIRM
YibE/F-like protein {ECO:0000313|EMBL:EDM62094.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
YibE/F-like protein.
Displaying items 1-30 of 80 in total

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